Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.86■■■□□ 2.21
CHST3Q7LGC8 ECEL1P2-201ENST00000461596 1295 ntBASIC28.86■■■□□ 2.21
CHST3Q7LGC8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.86■■■□□ 2.21
CHST3Q7LGC8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHST3Q7LGC8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHST3Q7LGC8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.85■■■□□ 2.21
CHST3Q7LGC8 AC025884.2-201ENST00000553429 711 ntBASIC28.85■■■□□ 2.21
CHST3Q7LGC8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.85■■■□□ 2.21
CHST3Q7LGC8 SMPD5-203ENST00000639008 1464 ntBASIC28.85■■■□□ 2.21
CHST3Q7LGC8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.84■■■□□ 2.21
CHST3Q7LGC8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.84■■■□□ 2.21
CHST3Q7LGC8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CHST3Q7LGC8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CHST3Q7LGC8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHST3Q7LGC8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.81■■■□□ 2.2
CHST3Q7LGC8 RNF126P1-201ENST00000567452 1320 ntBASIC28.81■■■□□ 2.2
CHST3Q7LGC8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.81■■■□□ 2.2
CHST3Q7LGC8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHST3Q7LGC8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHST3Q7LGC8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.79■■■□□ 2.2
CHST3Q7LGC8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHST3Q7LGC8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHST3Q7LGC8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHST3Q7LGC8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHST3Q7LGC8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.78■■■□□ 2.2
CHST3Q7LGC8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.78■■■□□ 2.2
CHST3Q7LGC8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.78■■■□□ 2.2
CHST3Q7LGC8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHST3Q7LGC8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHST3Q7LGC8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHST3Q7LGC8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHST3Q7LGC8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHST3Q7LGC8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHST3Q7LGC8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
CHST3Q7LGC8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
CHST3Q7LGC8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CHST3Q7LGC8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
CHST3Q7LGC8 AC091060.1-201ENST00000623524 1766 ntBASIC28.76■■■□□ 2.19
CHST3Q7LGC8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CHST3Q7LGC8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.75■■■□□ 2.19
CHST3Q7LGC8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHST3Q7LGC8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHST3Q7LGC8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.75■■■□□ 2.19
CHST3Q7LGC8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHST3Q7LGC8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.74■■■□□ 2.19
CHST3Q7LGC8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.74■■■□□ 2.19
CHST3Q7LGC8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CHST3Q7LGC8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CHST3Q7LGC8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.74■■■□□ 2.19
CHST3Q7LGC8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.73■■■□□ 2.19
CHST3Q7LGC8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
CHST3Q7LGC8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHST3Q7LGC8 ABHD17AP5-201ENST00000580133 923 ntBASIC28.72■■■□□ 2.19
CHST3Q7LGC8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHST3Q7LGC8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.72■■■□□ 2.19
CHST3Q7LGC8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 ERN1-208ENST00000606895 2068 ntBASIC28.71■■■□□ 2.19
CHST3Q7LGC8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 AC007029.1-201ENST00000604183 313 ntBASIC28.71■■■□□ 2.19
CHST3Q7LGC8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.71■■■□□ 2.19
CHST3Q7LGC8 AC092803.2-201ENST00000564287 1899 ntBASIC28.7■■■□□ 2.19
CHST3Q7LGC8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
CHST3Q7LGC8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHST3Q7LGC8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CHST3Q7LGC8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.69■■■□□ 2.18
CHST3Q7LGC8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.69■■■□□ 2.18
CHST3Q7LGC8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.69■■■□□ 2.18
CHST3Q7LGC8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHST3Q7LGC8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHST3Q7LGC8 MIR3960-201ENST00000583311 91 ntBASIC28.68■■■□□ 2.18
CHST3Q7LGC8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHST3Q7LGC8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.68■■■□□ 2.18
CHST3Q7LGC8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHST3Q7LGC8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
CHST3Q7LGC8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CHST3Q7LGC8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.67■■■□□ 2.18
CHST3Q7LGC8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHST3Q7LGC8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHST3Q7LGC8 RP9P-202ENST00000450133 1212 ntBASIC28.66■■■□□ 2.18
CHST3Q7LGC8 AC093536.1-201ENST00000569153 554 ntBASIC28.66■■■□□ 2.18
CHST3Q7LGC8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHST3Q7LGC8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
CHST3Q7LGC8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms