Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
APOC4P55056 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.89■□□□□ 0.45
APOC4P55056 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.89■□□□□ 0.45
APOC4P55056 MIR6765-201ENST00000614092 87 ntBASIC17.89■□□□□ 0.45
APOC4P55056 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC4P55056 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APOC4P55056 DUX4L18-201ENST00000553347 1267 ntBASIC17.88■□□□□ 0.45
APOC4P55056 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.88■□□□□ 0.45
APOC4P55056 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.88■□□□□ 0.45
APOC4P55056 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
APOC4P55056 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APOC4P55056 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APOC4P55056 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APOC4P55056 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOC4P55056 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.87■□□□□ 0.45
APOC4P55056 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOC4P55056 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOC4P55056 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
APOC4P55056 DUX4L9-201ENST00000449051 1259 ntBASIC17.87■□□□□ 0.45
APOC4P55056 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.87■□□□□ 0.45
APOC4P55056 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
APOC4P55056 BHLHE23-202ENST00000612929 1109 ntBASIC17.87■□□□□ 0.45
APOC4P55056 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.87■□□□□ 0.45
APOC4P55056 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOC4P55056 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOC4P55056 AC139795.1-202ENST00000500444 432 ntBASIC17.86■□□□□ 0.45
APOC4P55056 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOC4P55056 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.86■□□□□ 0.45
APOC4P55056 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOC4P55056 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
APOC4P55056 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
APOC4P55056 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOC4P55056 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.86■□□□□ 0.45
APOC4P55056 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
APOC4P55056 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APOC4P55056 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOC4P55056 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.85■□□□□ 0.45
APOC4P55056 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
APOC4P55056 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOC4P55056 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
APOC4P55056 AC142472.1-201ENST00000612013 1741 ntBASIC17.85■□□□□ 0.45
APOC4P55056 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOC4P55056 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.84■□□□□ 0.45
APOC4P55056 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.84■□□□□ 0.45
APOC4P55056 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOC4P55056 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOC4P55056 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.83■□□□□ 0.45
APOC4P55056 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOC4P55056 KRT18P10-201ENST00000388836 1287 ntBASIC17.83■□□□□ 0.44
APOC4P55056 AC074183.2-201ENST00000623112 922 ntBASIC17.83■□□□□ 0.44
APOC4P55056 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.82■□□□□ 0.44
APOC4P55056 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
APOC4P55056 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
APOC4P55056 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
APOC4P55056 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
APOC4P55056 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOC4P55056 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APOC4P55056 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOC4P55056 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOC4P55056 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOC4P55056 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOC4P55056 AP004609.3-201ENST00000610705 1884 ntBASIC17.8■□□□□ 0.44
APOC4P55056 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
APOC4P55056 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
APOC4P55056 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.8■□□□□ 0.44
APOC4P55056 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.8■□□□□ 0.44
APOC4P55056 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
APOC4P55056 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOC4P55056 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.8■□□□□ 0.44
APOC4P55056 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
APOC4P55056 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOC4P55056 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOC4P55056 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOC4P55056 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
APOC4P55056 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.79■□□□□ 0.44
APOC4P55056 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.79■□□□□ 0.44
APOC4P55056 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.79■□□□□ 0.44
APOC4P55056 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOC4P55056 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOC4P55056 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOC4P55056 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOC4P55056 SPCS2P3-201ENST00000500401 656 ntBASIC17.78■□□□□ 0.44
APOC4P55056 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.78■□□□□ 0.44
APOC4P55056 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOC4P55056 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.78■□□□□ 0.44
APOC4P55056 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.78■□□□□ 0.44
APOC4P55056 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOC4P55056 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.77■□□□□ 0.44
APOC4P55056 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOC4P55056 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APOC4P55056 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
APOC4P55056 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
APOC4P55056 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APOC4P55056 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms