Protein–RNA interactions for Protein: P20340

RAB6A, Ras-related protein Rab-6A, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6AP20340 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB6AP20340 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB6AP20340 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB6AP20340 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB6AP20340 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAB6AP20340 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB6AP20340 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAB6AP20340 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB6AP20340 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RAB6AP20340 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB6AP20340 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB6AP20340 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB6AP20340 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.78■□□□□ 0.92
RAB6AP20340 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB6AP20340 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB6AP20340 AC022211.4-201ENST00000625094 2161 ntBASIC20.78■□□□□ 0.92
RAB6AP20340 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6AP20340 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6AP20340 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.77■□□□□ 0.91
RAB6AP20340 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB6AP20340 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB6AP20340 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB6AP20340 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6AP20340 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB6AP20340 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6AP20340 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6AP20340 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6AP20340 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB6AP20340 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6AP20340 AL139125.2-201ENST00000623134 1869 ntBASIC20.75■□□□□ 0.91
RAB6AP20340 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RAB6AP20340 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6AP20340 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6AP20340 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.74■□□□□ 0.91
RAB6AP20340 AC138932.3-201ENST00000567634 1902 ntBASIC20.74■□□□□ 0.91
RAB6AP20340 AC087741.3-201ENST00000624270 1347 ntBASIC20.74■□□□□ 0.91
RAB6AP20340 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6AP20340 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6AP20340 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB6AP20340 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB6AP20340 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RAB6AP20340 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6AP20340 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB6AP20340 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6AP20340 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB6AP20340 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB6AP20340 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6AP20340 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6AP20340 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6AP20340 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6AP20340 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB6AP20340 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6AP20340 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB6AP20340 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB6AP20340 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB6AP20340 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB6AP20340 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6AP20340 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6AP20340 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RAB6AP20340 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RAB6AP20340 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6AP20340 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6AP20340 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6AP20340 AC096887.2-201ENST00000623443 1957 ntBASIC20.68■□□□□ 0.9
RAB6AP20340 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6AP20340 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB6AP20340 AC044849.2-201ENST00000606596 710 ntBASIC20.68■□□□□ 0.9
RAB6AP20340 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6AP20340 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB6AP20340 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6AP20340 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RAB6AP20340 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB6AP20340 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RAB6AP20340 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RAB6AP20340 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6AP20340 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB6AP20340 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6AP20340 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB6AP20340 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB6AP20340 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6AP20340 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB6AP20340 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB6AP20340 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB6AP20340 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB6AP20340 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB6AP20340 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB6AP20340 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms