Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.29■■□□□ 1.32
BCKDHAP12694 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHAP12694 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.29■■□□□ 1.32
BCKDHAP12694 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHAP12694 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHAP12694 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHAP12694 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHAP12694 CR559946.2-201ENST00000623684 991 ntBASIC23.27■■□□□ 1.32
BCKDHAP12694 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
BCKDHAP12694 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHAP12694 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
BCKDHAP12694 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BCKDHAP12694 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
BCKDHAP12694 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.26■■□□□ 1.31
BCKDHAP12694 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BCKDHAP12694 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.26■■□□□ 1.31
BCKDHAP12694 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHAP12694 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.25■■□□□ 1.31
BCKDHAP12694 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHAP12694 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
BCKDHAP12694 ABHD17AP4-201ENST00000411545 909 ntBASIC23.25■■□□□ 1.31
BCKDHAP12694 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHAP12694 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
BCKDHAP12694 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.24■■□□□ 1.31
BCKDHAP12694 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHAP12694 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.24■■□□□ 1.31
BCKDHAP12694 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHAP12694 AL359504.2-201ENST00000605506 1601 ntBASIC23.23■■□□□ 1.31
BCKDHAP12694 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHAP12694 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.23■■□□□ 1.31
BCKDHAP12694 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHAP12694 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHAP12694 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
BCKDHAP12694 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.22■■□□□ 1.31
BCKDHAP12694 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.22■■□□□ 1.31
BCKDHAP12694 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
BCKDHAP12694 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
BCKDHAP12694 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHAP12694 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
BCKDHAP12694 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHAP12694 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHAP12694 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.21■■□□□ 1.31
BCKDHAP12694 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.2■■□□□ 1.31
BCKDHAP12694 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BCKDHAP12694 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.2■■□□□ 1.3
BCKDHAP12694 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BCKDHAP12694 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BCKDHAP12694 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCKDHAP12694 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCKDHAP12694 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCKDHAP12694 MIR3648-2-201ENST00000581792 180 ntBASIC23.19■■□□□ 1.3
BCKDHAP12694 MIR3648-1-201ENST00000615959 180 ntBASIC23.19■■□□□ 1.3
BCKDHAP12694 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
BCKDHAP12694 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.18■■□□□ 1.3
BCKDHAP12694 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.17■■□□□ 1.3
BCKDHAP12694 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
BCKDHAP12694 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCKDHAP12694 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.16■■□□□ 1.3
BCKDHAP12694 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.16■■□□□ 1.3
BCKDHAP12694 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BCKDHAP12694 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BCKDHAP12694 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.15■■□□□ 1.3
BCKDHAP12694 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
BCKDHAP12694 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.14■■□□□ 1.3
BCKDHAP12694 AC096887.2-201ENST00000623443 1957 ntBASIC23.14■■□□□ 1.3
BCKDHAP12694 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
BCKDHAP12694 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
BCKDHAP12694 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
BCKDHAP12694 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BCKDHAP12694 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BCKDHAP12694 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
BCKDHAP12694 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
BCKDHAP12694 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
BCKDHAP12694 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.12■■□□□ 1.29
BCKDHAP12694 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms