Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHISA7A6NL88 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.03■■□□□ 1.6
SHISA7A6NL88 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.03■■□□□ 1.6
SHISA7A6NL88 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.03■■□□□ 1.6
SHISA7A6NL88 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.03■■□□□ 1.6
SHISA7A6NL88 WHAMMP3-201ENST00000611636 1609 ntBASIC25.03■■□□□ 1.6
SHISA7A6NL88 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHISA7A6NL88 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHISA7A6NL88 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SHISA7A6NL88 LONRF2P2-201ENST00000439212 571 ntBASIC25.02■■□□□ 1.6
SHISA7A6NL88 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHISA7A6NL88 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHISA7A6NL88 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHISA7A6NL88 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHISA7A6NL88 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHISA7A6NL88 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.01■■□□□ 1.59
SHISA7A6NL88 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHISA7A6NL88 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.01■■□□□ 1.59
SHISA7A6NL88 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHISA7A6NL88 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25■■□□□ 1.59
SHISA7A6NL88 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25■■□□□ 1.59
SHISA7A6NL88 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25■■□□□ 1.59
SHISA7A6NL88 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHISA7A6NL88 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHISA7A6NL88 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHISA7A6NL88 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHISA7A6NL88 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SHISA7A6NL88 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.99■■□□□ 1.59
SHISA7A6NL88 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SHISA7A6NL88 RPS2P7-201ENST00000447334 885 ntBASIC24.99■■□□□ 1.59
SHISA7A6NL88 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.98■■□□□ 1.59
SHISA7A6NL88 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.98■■□□□ 1.59
SHISA7A6NL88 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHISA7A6NL88 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SHISA7A6NL88 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.97■■□□□ 1.59
SHISA7A6NL88 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.97■■□□□ 1.59
SHISA7A6NL88 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.97■■□□□ 1.59
SHISA7A6NL88 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHISA7A6NL88 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.97■■□□□ 1.59
SHISA7A6NL88 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHISA7A6NL88 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHISA7A6NL88 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SHISA7A6NL88 Z92544.1-202ENST00000571933 1220 ntBASIC24.96■■□□□ 1.59
SHISA7A6NL88 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHISA7A6NL88 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHISA7A6NL88 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHISA7A6NL88 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.94■■□□□ 1.58
SHISA7A6NL88 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.94■■□□□ 1.58
SHISA7A6NL88 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHISA7A6NL88 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.94■■□□□ 1.58
SHISA7A6NL88 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHISA7A6NL88 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.93■■□□□ 1.58
SHISA7A6NL88 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
SHISA7A6NL88 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHISA7A6NL88 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SHISA7A6NL88 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHISA7A6NL88 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHISA7A6NL88 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SHISA7A6NL88 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHISA7A6NL88 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
SHISA7A6NL88 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHISA7A6NL88 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
SHISA7A6NL88 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHISA7A6NL88 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
SHISA7A6NL88 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
SHISA7A6NL88 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHISA7A6NL88 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHISA7A6NL88 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHISA7A6NL88 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHISA7A6NL88 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHISA7A6NL88 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SHISA7A6NL88 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SHISA7A6NL88 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
SHISA7A6NL88 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHISA7A6NL88 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.89■■□□□ 1.58
SHISA7A6NL88 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHISA7A6NL88 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SHISA7A6NL88 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
SHISA7A6NL88 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.89■■□□□ 1.57
SHISA7A6NL88 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
SHISA7A6NL88 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SHISA7A6NL88 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SHISA7A6NL88 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.88■■□□□ 1.57
SHISA7A6NL88 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.88■■□□□ 1.57
SHISA7A6NL88 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
SHISA7A6NL88 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.87■■□□□ 1.57
SHISA7A6NL88 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SHISA7A6NL88 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.87■■□□□ 1.57
SHISA7A6NL88 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.87■■□□□ 1.57
SHISA7A6NL88 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SHISA7A6NL88 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHISA7A6NL88 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHISA7A6NL88 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.86■■□□□ 1.57
SHISA7A6NL88 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHISA7A6NL88 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHISA7A6NL88 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHISA7A6NL88 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SHISA7A6NL88 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
SHISA7A6NL88 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHISA7A6NL88 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms