Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-4A0A1B0GX49 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-4A0A1B0GX49 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBV6-4A0A1B0GX49 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-4A0A1B0GX49 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-4A0A1B0GX49 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-4A0A1B0GX49 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-4A0A1B0GX49 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV6-4A0A1B0GX49 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-4A0A1B0GX49 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-4A0A1B0GX49 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-4A0A1B0GX49 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-4A0A1B0GX49 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-4A0A1B0GX49 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-4A0A1B0GX49 MIR639-201ENST00000384974 98 ntBASIC17.16■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-4A0A1B0GX49 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-4A0A1B0GX49 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 AC010501.1-201ENST00000606270 1962 ntBASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRBV6-4A0A1B0GX49 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV6-4A0A1B0GX49 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-4A0A1B0GX49 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV6-4A0A1B0GX49 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-4A0A1B0GX49 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-4A0A1B0GX49 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRBV6-4A0A1B0GX49 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-4A0A1B0GX49 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV6-4A0A1B0GX49 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-4A0A1B0GX49 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-4A0A1B0GX49 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV6-4A0A1B0GX49 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-4A0A1B0GX49 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-4A0A1B0GX49 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRBV6-4A0A1B0GX49 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRBV6-4A0A1B0GX49 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV6-4A0A1B0GX49 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-4A0A1B0GX49 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-4A0A1B0GX49 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-4A0A1B0GX49 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV6-4A0A1B0GX49 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-4A0A1B0GX49 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV6-4A0A1B0GX49 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-4A0A1B0GX49 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-4A0A1B0GX49 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV6-4A0A1B0GX49 ERN1-208ENST00000606895 2068 ntBASIC17.08■□□□□ 0.33
TRBV6-4A0A1B0GX49 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV6-4A0A1B0GX49 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.08■□□□□ 0.32
TRBV6-4A0A1B0GX49 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-4A0A1B0GX49 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRBV6-4A0A1B0GX49 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV6-4A0A1B0GX49 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 AC060814.1-201ENST00000554326 538 ntBASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-4A0A1B0GX49 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms