Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.38■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 AC087393.1-201ENST00000582896 145 ntBASIC24.38■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.38■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.38■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.37■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.35■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.34■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.34■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.34■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.33■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 RPS2P7-201ENST00000447334 885 ntBASIC24.33■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.33■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.33■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.32■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 ABCB10P1-201ENST00000614297 2181 ntBASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 LONRF2P2-201ENST00000439212 571 ntBASIC24.3■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.3■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.3■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.28■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 Z92544.1-202ENST00000571933 1220 ntBASIC24.28■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
MSANTD3-TMEFF1A0A0A6YYJ0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.24■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.23■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.23■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 AC008406.3-201ENST00000620001 1374 ntBASIC24.22■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms