Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ASAH1-257ENST00000637752 2708 nt8.52□□□□□ -1.056e-7■□□□□ 8.5
SND1Q7KZF4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.79■■□□□ 1.882e-26■□□□□ 8.5
SND1Q7KZF4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.52e-26■□□□□ 8.5
SND1Q7KZF4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.622e-26■□□□□ 8.5
SND1Q7KZF4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.89e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-201ENST00000236017 663 ntTSL 218.65■□□□□ 0.589e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.68■□□□□ 0.429e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.319e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-208ENST00000486720 447 ntTSL 215.28■□□□□ 0.049e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-202ENST00000359944 1054 ntTSL 1 (best)15.07■□□□□ 09e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-203ENST00000468210 824 ntTSL 214.96□□□□□ -0.019e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.82□□□□□ -0.049e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-205ENST00000461320 1038 ntTSL 312.58□□□□□ -0.49e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-210ENST00000482604 671 ntTSL 512.25□□□□□ -0.459e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC12.11□□□□□ -0.479e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-209ENST00000480374 729 ntTSL 312.02□□□□□ -0.499e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-201ENST00000259037 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.619e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC9.75□□□□□ -0.859e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-204ENST00000471112 684 ntTSL 39.24□□□□□ -0.939e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-207ENST00000476587 635 ntTSL 28.98□□□□□ -0.979e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-215ENST00000496904 175 ntTSL 58.66□□□□□ -1.029e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-212ENST00000491054 1014 ntTSL 28.31□□□□□ -1.089e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-207ENST00000486308 574 ntTSL 37.7□□□□□ -1.189e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-206ENST00000473500 689 ntTSL 37.11□□□□□ -1.279e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-213ENST00000493716 476 ntTSL 26.86□□□□□ -1.319e-9■□□□□ 8.5
SND1Q7KZF4 HIST1H2BN-202ENST00000449538 715 ntTSL 1 (best)18.11■□□□□ 0.494e-7■□□□□ 8.4
SND1Q7KZF4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.67□□□□□ -0.864e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.444e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.444e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.584e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC11.02□□□□□ -0.654e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.664e-7■□□□□ 8.4
SND1Q7KZF4 TTC3-223ENST00000492275 769 ntTSL 326.72■■□□□ 1.871e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.57■■□□□ 1.681e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-212ENST00000463216 842 ntTSL 524.81■■□□□ 1.561e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-224ENST00000494243 861 ntTSL 524.61■■□□□ 1.531e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-210ENST00000450533 2451 ntTSL 1 (best)24.39■■□□□ 1.51e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-217ENST00000481605 1540 ntTSL 524.15■■□□□ 1.461e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.19■□□□□ 0.661e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-209ENST00000438055 3606 ntTSL 518.54■□□□□ 0.561e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-207ENST00000418766 3771 ntTSL 518.25■□□□□ 0.511e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-219ENST00000485402 3626 ntTSL 516.55■□□□□ 0.241e-6■□□□□ 8.4
SND1Q7KZF4 PLOD3-207ENST00000456079 563 ntTSL 415.33■□□□□ 0.041e-6■□□□□ 8.4
SND1Q7KZF4 FAM234A-209ENST00000424016 646 ntTSL 314.62□□□□□ -0.071e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.691e-6■□□□□ 8.4
SND1Q7KZF4 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.93□□□□□ -0.821e-6■□□□□ 8.4
SND1Q7KZF4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.131e-6■□□□□ 8.4
SND1Q7KZF4 CPOX-203ENST00000512905 593 ntTSL 57.33□□□□□ -1.241e-6■□□□□ 8.4
SND1Q7KZF4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.251e-6■□□□□ 8.4
SND1Q7KZF4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.281e-6■□□□□ 8.4
SND1Q7KZF4 TALDO1-209ENST00000533796 503 ntTSL 212.31□□□□□ -0.441e-17■□□□□ 8.4
SND1Q7KZF4 TALDO1-204ENST00000530119 1191 ntTSL 212.07□□□□□ -0.481e-17■□□□□ 8.4
SND1Q7KZF4 MCM7-211ENST00000491245 648 ntTSL 1 (best)9.41□□□□□ -0.95e-7■□□□□ 8.4
SND1Q7KZF4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.26e-15■□□□□ 8.4
SND1Q7KZF4 NOMO1-204ENST00000566823 1898 ntTSL 213.87□□□□□ -0.191e-28■□□□□ 8.4
SND1Q7KZF4 NOMO1-202ENST00000565655 666 ntTSL 311.19□□□□□ -0.621e-28■□□□□ 8.4
SND1Q7KZF4 NDUFA13-205ENST00000511180 593 ntTSL 216.03■□□□□ 0.163e-12■□□□□ 8.4
SND1Q7KZF4 LSR-208ENST00000599658 343 ntTSL 312.2□□□□□ -0.461e-8■□□□□ 8.4
SND1Q7KZF4 FGFR4-206ENST00000483872 663 ntTSL 311.79□□□□□ -0.525e-17■□□□□ 8.4
SND1Q7KZF4 BSG-212ENST00000590218 545 ntTSL 220.04■□□□□ 0.82e-26■□□□□ 8.4
SND1Q7KZF4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.361e-6■□□□□ 8.4
SND1Q7KZF4 MCM7-204ENST00000425308 1497 ntTSL 329.34■■■□□ 2.291e-6■□□□□ 8.4
SND1Q7KZF4 MDH2-207ENST00000490105 569 ntTSL 323.12■■□□□ 1.294e-11■□□□□ 8.4
SND1Q7KZF4 RUVBL2-209ENST00000596837 682 ntTSL 222.58■■□□□ 1.211e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.071e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-203ENST00000594017 959 ntTSL 221.22■□□□□ 0.991e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-202ENST00000593570 813 ntTSL 521.13■□□□□ 0.971e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-204ENST00000594338 1853 ntTSL 520.63■□□□□ 0.891e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.53■□□□□ 0.881e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.841e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-208ENST00000596247 1563 ntTSL 219.91■□□□□ 0.781e-6■□□□□ 8.4
SND1Q7KZF4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.88■□□□□ 0.776e-7■□□□□ 8.4
SND1Q7KZF4 MAGEA6-202ENST00000412733 862 ntTSL 519.19■□□□□ 0.664e-11■□□□□ 8.4
SND1Q7KZF4 COPS6-210ENST00000496358 610 ntTSL 219.01■□□□□ 0.631e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-206ENST00000468499 745 ntTSL 318.32■□□□□ 0.521e-6■□□□□ 8.4
SND1Q7KZF4 FERMT3-208ENST00000545896 911 ntTSL 518.16■□□□□ 0.51e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-204ENST00000463900 1645 ntTSL 1 (best)18.16■□□□□ 0.51e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-201ENST00000221413 1478 ntTSL 1 (best)17.98■□□□□ 0.471e-6■□□□□ 8.4
SND1Q7KZF4 FERMT3-203ENST00000540554 379 ntTSL 317.83■□□□□ 0.441e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-202ENST00000425118 1581 ntTSL 1 (best)17.66■□□□□ 0.421e-6■□□□□ 8.4
SND1Q7KZF4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.361e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-214ENST00000480194 455 ntTSL 517.22■□□□□ 0.351e-6■□□□□ 8.4
SND1Q7KZF4 CD37-210ENST00000597033 563 ntTSL 417.06■□□□□ 0.321e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-206ENST00000466894 1658 ntTSL 517.01■□□□□ 0.311e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-203ENST00000460341 565 ntTSL 416.87■□□□□ 0.291e-6■□□□□ 8.4
SND1Q7KZF4 MAGEA6-203ENST00000457643 921 ntTSL 316.83■□□□□ 0.284e-11■□□□□ 8.4
SND1Q7KZF4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.82■□□□□ 0.286e-7■□□□□ 8.4
SND1Q7KZF4 SDHC-209ENST00000515731 651 ntTSL 316.6■□□□□ 0.251e-6■□□□□ 8.4
SND1Q7KZF4 OCIAD1-227ENST00000513641 577 ntTSL 516.31■□□□□ 0.21e-6■□□□□ 8.4
SND1Q7KZF4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.181e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.92■□□□□ 0.141e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.131e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.72■□□□□ 0.111e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.53■□□□□ 0.081e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.53■□□□□ 0.081e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)15.45■□□□□ 0.061e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-216ENST00000486421 505 ntTSL 515.4■□□□□ 0.061e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-209ENST00000473166 752 ntTSL 315.18■□□□□ 0.021e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.051e-6■□□□□ 8.4
SND1Q7KZF4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.066e-7■□□□□ 8.4
Retrieved 100 of 13,567 protein–RNA pairs in 380.2 ms