RNA–Protein interactions for RNA: ENST00000461320.5

APH1A-205, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 1,038 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-205ENST00000461320 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
APH1A-205ENST00000461320 ABCC9O60706 1549 aa26.56■■□□□ 1.84
APH1A-205ENST00000461320 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
APH1A-205ENST00000461320 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
APH1A-205ENST00000461320 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
APH1A-205ENST00000461320 NACADO15069 1562 aa25.09■■□□□ 1.61
APH1A-205ENST00000461320 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
APH1A-205ENST00000461320 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
APH1A-205ENST00000461320 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
APH1A-205ENST00000461320 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
APH1A-205ENST00000461320 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
APH1A-205ENST00000461320 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
APH1A-205ENST00000461320 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
APH1A-205ENST00000461320 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
APH1A-205ENST00000461320 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
APH1A-205ENST00000461320 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
APH1A-205ENST00000461320 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
APH1A-205ENST00000461320 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
APH1A-205ENST00000461320 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
APH1A-205ENST00000461320 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
APH1A-205ENST00000461320 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
APH1A-205ENST00000461320 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
APH1A-205ENST00000461320 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
APH1A-205ENST00000461320 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
APH1A-205ENST00000461320 MROH2BQ7Z745 1585 aa22.96■■□□□ 1.27
APH1A-205ENST00000461320 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
APH1A-205ENST00000461320 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
APH1A-205ENST00000461320 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
APH1A-205ENST00000461320 NESP48681 1621 aa22.85■■□□□ 1.25
APH1A-205ENST00000461320 DNAJC5Q9H3Z4 198 aa22.84■■□□□ 1.25
APH1A-205ENST00000461320 CUX2O14529 1486 aa22.81■■□□□ 1.24
APH1A-205ENST00000461320 WIZO95785 1651 aa22.69■■□□□ 1.22
APH1A-205ENST00000461320 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
APH1A-205ENST00000461320 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
APH1A-205ENST00000461320 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
APH1A-205ENST00000461320 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
APH1A-205ENST00000461320 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
APH1A-205ENST00000461320 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
APH1A-205ENST00000461320 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
APH1A-205ENST00000461320 MRC2Q9UBG0 1479 aa22.32■■□□□ 1.16
APH1A-205ENST00000461320 CFTRP13569 1480 aa22.28■■□□□ 1.16
APH1A-205ENST00000461320 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
APH1A-205ENST00000461320 WDR62O43379 1518 aa22.25■■□□□ 1.15
APH1A-205ENST00000461320 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
APH1A-205ENST00000461320 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
APH1A-205ENST00000461320 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
APH1A-205ENST00000461320 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
APH1A-205ENST00000461320 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
APH1A-205ENST00000461320 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
APH1A-205ENST00000461320 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
APH1A-205ENST00000461320 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
APH1A-205ENST00000461320 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
APH1A-205ENST00000461320 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
APH1A-205ENST00000461320 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
APH1A-205ENST00000461320 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
APH1A-205ENST00000461320 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.06
APH1A-205ENST00000461320 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
APH1A-205ENST00000461320 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
APH1A-205ENST00000461320 EIF4G3O43432 1585 aaKnown RBP21.59■■□□□ 1.05
APH1A-205ENST00000461320 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
APH1A-205ENST00000461320 SOGA1O94964 1423 aa21.56■■□□□ 1.04
APH1A-205ENST00000461320 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
APH1A-205ENST00000461320 CUX1P39880 1505 aa21.54■■□□□ 1.04
APH1A-205ENST00000461320 FBLN2P98095 1184 aa21.51■■□□□ 1.03
APH1A-205ENST00000461320 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
APH1A-205ENST00000461320 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
APH1A-205ENST00000461320 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
APH1A-205ENST00000461320 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
APH1A-205ENST00000461320 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
APH1A-205ENST00000461320 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
APH1A-205ENST00000461320 CHD1O14646 1710 aa21.37■■□□□ 1.01
APH1A-205ENST00000461320 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
APH1A-205ENST00000461320 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
APH1A-205ENST00000461320 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
APH1A-205ENST00000461320 GRIN2BQ13224 1484 aa21.32■■□□□ 1
APH1A-205ENST00000461320 WDR97A6NE52 1622 aa21.32■■□□□ 1
APH1A-205ENST00000461320 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
APH1A-205ENST00000461320 TOP2BQ02880 1626 aa21.29■■□□□ 1
APH1A-205ENST00000461320 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
APH1A-205ENST00000461320 GAPVD1Q14C86 1478 aa21.27■■□□□ 1
APH1A-205ENST00000461320 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
APH1A-205ENST00000461320 SYNJ1O43426 1573 aa21.27■□□□□ 0.99
APH1A-205ENST00000461320 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
APH1A-205ENST00000461320 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
APH1A-205ENST00000461320 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
APH1A-205ENST00000461320 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
APH1A-205ENST00000461320 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
APH1A-205ENST00000461320 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
APH1A-205ENST00000461320 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
APH1A-205ENST00000461320 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
APH1A-205ENST00000461320 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
APH1A-205ENST00000461320 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
APH1A-205ENST00000461320 NUP160Q12769 1436 aa20.99■□□□□ 0.95
APH1A-205ENST00000461320 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
APH1A-205ENST00000461320 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
APH1A-205ENST00000461320 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
APH1A-205ENST00000461320 IGF1RP08069 1367 aa20.9■□□□□ 0.94
APH1A-205ENST00000461320 JPH4Q96JJ6 628 aa20.85■□□□□ 0.93
APH1A-205ENST00000461320 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
APH1A-205ENST00000461320 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms