RNA–Protein interactions for RNA: ENST00000425118.5

AUP1-202, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 1 (best)

Gene AUP1, Length 1,581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-202ENST00000425118 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
AUP1-202ENST00000425118 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
AUP1-202ENST00000425118 ABCC9O60706 1549 aa35.47■■■■□ 3.27
AUP1-202ENST00000425118 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
AUP1-202ENST00000425118 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
AUP1-202ENST00000425118 RB1CC1Q8TDY2 1594 aa33.97■■■■□ 3.03
AUP1-202ENST00000425118 NACADO15069 1562 aa33.94■■■■□ 3.02
AUP1-202ENST00000425118 MYO15BQ96JP2 1530 aa33.68■■■□□ 2.98
AUP1-202ENST00000425118 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
AUP1-202ENST00000425118 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.923e-7■■□□□ 14.3
AUP1-202ENST00000425118 UNC13AQ9UPW8 1703 aa33.18■■■□□ 2.9
AUP1-202ENST00000425118 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
AUP1-202ENST00000425118 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
AUP1-202ENST00000425118 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
AUP1-202ENST00000425118 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
AUP1-202ENST00000425118 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
AUP1-202ENST00000425118 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
AUP1-202ENST00000425118 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
AUP1-202ENST00000425118 SMARCA4P51532 1647 aa31.61■■■□□ 2.65
AUP1-202ENST00000425118 BAZ1AQ9NRL2 1556 aaPredicted RBP31.59■■■□□ 2.65
AUP1-202ENST00000425118 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
AUP1-202ENST00000425118 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
AUP1-202ENST00000425118 NCAPD3P42695 1498 aa31.38■■■□□ 2.61
AUP1-202ENST00000425118 SMARCA2P51531 1590 aa31.35■■■□□ 2.61
AUP1-202ENST00000425118 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
AUP1-202ENST00000425118 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
AUP1-202ENST00000425118 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
AUP1-202ENST00000425118 WIZO95785 1651 aa31.19■■■□□ 2.58
AUP1-202ENST00000425118 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
AUP1-202ENST00000425118 SUPT5HO00267 1087 aaKnown RBP30.83■■■□□ 2.53
AUP1-202ENST00000425118 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
AUP1-202ENST00000425118 NESP48681 1621 aa30.73■■■□□ 2.51
AUP1-202ENST00000425118 CADPSQ9ULU8 1353 aa30.54■■■□□ 2.48
AUP1-202ENST00000425118 CCDC88BA6NC98 1476 aa30.53■■■□□ 2.48
AUP1-202ENST00000425118 ERCC6Q03468 1493 aa30.52■■■□□ 2.48
AUP1-202ENST00000425118 LAMC3Q9Y6N6 1575 aa30.47■■■□□ 2.47
AUP1-202ENST00000425118 PDS5BQ9NTI5 1447 aa30.36■■■□□ 2.45
AUP1-202ENST00000425118 CFTRP13569 1480 aa30.34■■■□□ 2.45
AUP1-202ENST00000425118 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
AUP1-202ENST00000425118 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.43
AUP1-202ENST00000425118 CEP164Q9UPV0 1460 aa30.11■■■□□ 2.41
AUP1-202ENST00000425118 THOC2Q8NI27 1593 aaKnown RBP30.05■■■□□ 2.4
AUP1-202ENST00000425118 MRC2Q9UBG0 1479 aa30.01■■■□□ 2.4
AUP1-202ENST00000425118 CUX2O14529 1486 aa29.98■■■□□ 2.39
AUP1-202ENST00000425118 PRDM2Q13029 1718 aa29.94■■■□□ 2.38
AUP1-202ENST00000425118 URB2Q14146 1524 aaKnown RBP29.87■■■□□ 2.37
AUP1-202ENST00000425118 WDR62O43379 1518 aa29.86■■■□□ 2.37
AUP1-202ENST00000425118 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
AUP1-202ENST00000425118 ABCC8Q09428 1581 aa29.61■■■□□ 2.33
AUP1-202ENST00000425118 DNMBPQ6XZF7 1577 aa29.61■■■□□ 2.33
AUP1-202ENST00000425118 CUX1P39880 1505 aa29.55■■■□□ 2.32
AUP1-202ENST00000425118 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
AUP1-202ENST00000425118 IFT140Q96RY7 1462 aa29.45■■■□□ 2.3
AUP1-202ENST00000425118 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.3
AUP1-202ENST00000425118 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
AUP1-202ENST00000425118 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
AUP1-202ENST00000425118 ZNF608Q9ULD9 1512 aaPredicted RBP29.42■■■□□ 2.3
AUP1-202ENST00000425118 SOGA1O94964 1423 aa29.41■■■□□ 2.3
AUP1-202ENST00000425118 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
AUP1-202ENST00000425118 AQRO60306 1485 aaKnown RBP eCLIP29.31■■■□□ 2.283e-11■■■■■ 56
AUP1-202ENST00000425118 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
AUP1-202ENST00000425118 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
AUP1-202ENST00000425118 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
AUP1-202ENST00000425118 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
AUP1-202ENST00000425118 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
AUP1-202ENST00000425118 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
AUP1-202ENST00000425118 FBLN2P98095 1184 aa29.08■■■□□ 2.25
AUP1-202ENST00000425118 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
AUP1-202ENST00000425118 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
AUP1-202ENST00000425118 WDR97A6NE52 1622 aa29.03■■■□□ 2.24
AUP1-202ENST00000425118 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
AUP1-202ENST00000425118 GRIN2BQ13224 1484 aa28.98■■■□□ 2.23
AUP1-202ENST00000425118 SNAPC4Q5SXM2 1469 aa28.97■■■□□ 2.23
AUP1-202ENST00000425118 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
AUP1-202ENST00000425118 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
AUP1-202ENST00000425118 CHMP7Q8WUX9 453 aaPredicted RBP28.91■■■□□ 2.22
AUP1-202ENST00000425118 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
AUP1-202ENST00000425118 MAGI1Q96QZ7 1491 aaPredicted RBP28.83■■■□□ 2.21
AUP1-202ENST00000425118 KIF27Q86VH2 1401 aa28.8■■■□□ 2.2
AUP1-202ENST00000425118 CHD1O14646 1710 aa28.78■■■□□ 2.2
AUP1-202ENST00000425118 SYNJ2O15056 1496 aa28.76■■■□□ 2.19
AUP1-202ENST00000425118 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
AUP1-202ENST00000425118 IGF1RP08069 1367 aa28.72■■■□□ 2.19
AUP1-202ENST00000425118 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
AUP1-202ENST00000425118 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
AUP1-202ENST00000425118 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
AUP1-202ENST00000425118 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
AUP1-202ENST00000425118 GRIN2AQ12879 1464 aa28.61■■■□□ 2.17
AUP1-202ENST00000425118 CARMIL1Q5VZK9 1371 aa28.55■■■□□ 2.16
AUP1-202ENST00000425118 FAM9AQ8IZU1 332 aaPredicted RBP28.55■■■□□ 2.16
AUP1-202ENST00000425118 CEP170Q5SW79 1584 aa28.46■■■□□ 2.15
AUP1-202ENST00000425118 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.14
AUP1-202ENST00000425118 CUL7Q14999 1698 aa28.44■■■□□ 2.14
AUP1-202ENST00000425118 NUP160Q12769 1436 aa28.44■■■□□ 2.14
AUP1-202ENST00000425118 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
AUP1-202ENST00000425118 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
AUP1-202ENST00000425118 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
AUP1-202ENST00000425118 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
AUP1-202ENST00000425118 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
AUP1-202ENST00000425118 CYB5RLQ6IPT4 315 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms