RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 NISCHQ9Y2I1 1504 aa34.94■■■■□ 3.18
APH1A-208ENST00000486720 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
APH1A-208ENST00000486720 ABCC9O60706 1549 aa29.9■■■□□ 2.38
APH1A-208ENST00000486720 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
APH1A-208ENST00000486720 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
APH1A-208ENST00000486720 NACADO15069 1562 aa29.01■■■□□ 2.24
APH1A-208ENST00000486720 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
APH1A-208ENST00000486720 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
APH1A-208ENST00000486720 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
APH1A-208ENST00000486720 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
APH1A-208ENST00000486720 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
APH1A-208ENST00000486720 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
APH1A-208ENST00000486720 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
APH1A-208ENST00000486720 SHROOM4Q9ULL8 1493 aa27.86■■■□□ 2.05
APH1A-208ENST00000486720 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
APH1A-208ENST00000486720 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
APH1A-208ENST00000486720 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
APH1A-208ENST00000486720 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
APH1A-208ENST00000486720 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
APH1A-208ENST00000486720 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
APH1A-208ENST00000486720 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
APH1A-208ENST00000486720 SMARCA2P51531 1590 aa26.83■■□□□ 1.89
APH1A-208ENST00000486720 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
APH1A-208ENST00000486720 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
APH1A-208ENST00000486720 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
APH1A-208ENST00000486720 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
APH1A-208ENST00000486720 HMGXB3Q12766 1538 aa26.66■■□□□ 1.86
APH1A-208ENST00000486720 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
APH1A-208ENST00000486720 WIZO95785 1651 aa26.61■■□□□ 1.85
APH1A-208ENST00000486720 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
APH1A-208ENST00000486720 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
APH1A-208ENST00000486720 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
APH1A-208ENST00000486720 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
APH1A-208ENST00000486720 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
APH1A-208ENST00000486720 NESP48681 1621 aa25.95■■□□□ 1.74
APH1A-208ENST00000486720 CFTRP13569 1480 aa25.91■■□□□ 1.74
APH1A-208ENST00000486720 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
APH1A-208ENST00000486720 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
APH1A-208ENST00000486720 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
APH1A-208ENST00000486720 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
APH1A-208ENST00000486720 KIF21AQ7Z4S6 1674 aa25.65■■□□□ 1.7
APH1A-208ENST00000486720 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
APH1A-208ENST00000486720 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
APH1A-208ENST00000486720 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
APH1A-208ENST00000486720 WDR62O43379 1518 aa25.42■■□□□ 1.66
APH1A-208ENST00000486720 CUX2O14529 1486 aa25.41■■□□□ 1.66
APH1A-208ENST00000486720 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
APH1A-208ENST00000486720 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
APH1A-208ENST00000486720 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
APH1A-208ENST00000486720 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
APH1A-208ENST00000486720 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
APH1A-208ENST00000486720 CUX1P39880 1505 aa25.22■■□□□ 1.63
APH1A-208ENST00000486720 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
APH1A-208ENST00000486720 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
APH1A-208ENST00000486720 FGD5Q6ZNL6 1462 aa25.11■■□□□ 1.61
APH1A-208ENST00000486720 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
APH1A-208ENST00000486720 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
APH1A-208ENST00000486720 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
APH1A-208ENST00000486720 SOGA1O94964 1423 aa25.03■■□□□ 1.6
APH1A-208ENST00000486720 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
APH1A-208ENST00000486720 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
APH1A-208ENST00000486720 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.57
APH1A-208ENST00000486720 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.57
APH1A-208ENST00000486720 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
APH1A-208ENST00000486720 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
APH1A-208ENST00000486720 EIF4G3O43432 1585 aaKnown RBP24.83■■□□□ 1.57
APH1A-208ENST00000486720 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
APH1A-208ENST00000486720 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
APH1A-208ENST00000486720 GAPVD1Q14C86 1478 aa24.75■■□□□ 1.55
APH1A-208ENST00000486720 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
APH1A-208ENST00000486720 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
APH1A-208ENST00000486720 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
APH1A-208ENST00000486720 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
APH1A-208ENST00000486720 PBRM1Q86U86 1689 aa24.64■■□□□ 1.53
APH1A-208ENST00000486720 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
APH1A-208ENST00000486720 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
APH1A-208ENST00000486720 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
APH1A-208ENST00000486720 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
APH1A-208ENST00000486720 IGF1RP08069 1367 aa24.51■■□□□ 1.51
APH1A-208ENST00000486720 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
APH1A-208ENST00000486720 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
APH1A-208ENST00000486720 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
APH1A-208ENST00000486720 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
APH1A-208ENST00000486720 EEA1Q15075 1411 aa24.47■■□□□ 1.51
APH1A-208ENST00000486720 FBLN2P98095 1184 aa24.47■■□□□ 1.51
APH1A-208ENST00000486720 CUL7Q14999 1698 aa24.46■■□□□ 1.51
APH1A-208ENST00000486720 CHD1O14646 1710 aa24.43■■□□□ 1.5
APH1A-208ENST00000486720 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
APH1A-208ENST00000486720 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
APH1A-208ENST00000486720 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
APH1A-208ENST00000486720 CSRNP3Q8WYN3 585 aa24.35■■□□□ 1.49
APH1A-208ENST00000486720 FAM9AQ8IZU1 332 aaPredicted RBP24.29■■□□□ 1.48
APH1A-208ENST00000486720 RAPGEF2Q9Y4G8 1499 aa24.29■■□□□ 1.48
APH1A-208ENST00000486720 PRXQ9BXM0 1461 aa24.27■■□□□ 1.48
APH1A-208ENST00000486720 NUP160Q12769 1436 aa24.27■■□□□ 1.48
APH1A-208ENST00000486720 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
APH1A-208ENST00000486720 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
APH1A-208ENST00000486720 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
APH1A-208ENST00000486720 KIF21BO75037 1637 aa24.14■■□□□ 1.46
APH1A-208ENST00000486720 KIAA0586Q9BVV6 1533 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms