RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 NISCHQ9Y2I1 1504 aa44.63■■■■■ 4.73
COPS6-210ENST00000496358 CCDC180Q9P1Z9 1646 aa39.73■■■■□ 3.95
COPS6-210ENST00000496358 ABCC9O60706 1549 aa38.98■■■■□ 3.83
COPS6-210ENST00000496358 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
COPS6-210ENST00000496358 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
COPS6-210ENST00000496358 NACADO15069 1562 aa37.37■■■■□ 3.57
COPS6-210ENST00000496358 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.53
COPS6-210ENST00000496358 MYO15BQ96JP2 1530 aa37.08■■■■□ 3.53
COPS6-210ENST00000496358 DCAF1Q9Y4B6 1507 aa36.89■■■■□ 3.5
COPS6-210ENST00000496358 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
COPS6-210ENST00000496358 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
COPS6-210ENST00000496358 PABPN1Q86U42 306 aaKnown RBP eCLIP36.43■■■■□ 3.42
COPS6-210ENST00000496358 BICRAQ9NZM4 1560 aa36.3■■■■□ 3.4
COPS6-210ENST00000496358 SCRIBQ14160 1630 aa36.27■■■■□ 3.4
COPS6-210ENST00000496358 SHROOM4Q9ULL8 1493 aa35.88■■■■□ 3.33
COPS6-210ENST00000496358 EIF4G1Q04637 1599 aaKnown RBP35.36■■■■□ 3.25
COPS6-210ENST00000496358 CC2D2AQ9P2K1 1620 aa35.26■■■■□ 3.24
COPS6-210ENST00000496358 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
COPS6-210ENST00000496358 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
COPS6-210ENST00000496358 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
COPS6-210ENST00000496358 ATAD2BQ9ULI0 1458 aa34.47■■■■□ 3.11
COPS6-210ENST00000496358 NCAPD3P42695 1498 aa34.46■■■■□ 3.11
COPS6-210ENST00000496358 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
COPS6-210ENST00000496358 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
COPS6-210ENST00000496358 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
COPS6-210ENST00000496358 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
COPS6-210ENST00000496358 PEG3Q9GZU2 1588 aa34.29■■■■□ 3.08
COPS6-210ENST00000496358 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
COPS6-210ENST00000496358 WIZO95785 1651 aa34.06■■■■□ 3.04
COPS6-210ENST00000496358 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
COPS6-210ENST00000496358 NESP48681 1621 aa33.7■■■□□ 2.99
COPS6-210ENST00000496358 TOP2AP11388 1531 aaKnown RBP33.65■■■□□ 2.98
COPS6-210ENST00000496358 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
COPS6-210ENST00000496358 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
COPS6-210ENST00000496358 CADPSQ9ULU8 1353 aa33.47■■■□□ 2.95
COPS6-210ENST00000496358 PDS5BQ9NTI5 1447 aa33.38■■■□□ 2.93
COPS6-210ENST00000496358 KIF21AQ7Z4S6 1674 aa33.33■■■□□ 2.93
COPS6-210ENST00000496358 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
COPS6-210ENST00000496358 CUX2O14529 1486 aa33.26■■■□□ 2.92
COPS6-210ENST00000496358 CFTRP13569 1480 aa33.24■■■□□ 2.91
COPS6-210ENST00000496358 THOC2Q8NI27 1593 aaKnown RBP33.19■■■□□ 2.9
COPS6-210ENST00000496358 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
COPS6-210ENST00000496358 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
COPS6-210ENST00000496358 CEP164Q9UPV0 1460 aa33.07■■■□□ 2.88
COPS6-210ENST00000496358 PRDM2Q13029 1718 aa33.05■■■□□ 2.88
COPS6-210ENST00000496358 MRC2Q9UBG0 1479 aa33.04■■■□□ 2.88
COPS6-210ENST00000496358 WDR62O43379 1518 aa32.92■■■□□ 2.86
COPS6-210ENST00000496358 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
COPS6-210ENST00000496358 ABCC8Q09428 1581 aa32.56■■■□□ 2.8
COPS6-210ENST00000496358 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
COPS6-210ENST00000496358 DNMBPQ6XZF7 1577 aa32.52■■■□□ 2.8
COPS6-210ENST00000496358 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
COPS6-210ENST00000496358 IFT140Q96RY7 1462 aa32.37■■■□□ 2.77
COPS6-210ENST00000496358 CUX1P39880 1505 aa32.27■■■□□ 2.76
COPS6-210ENST00000496358 POLA1P09884 1462 aaPredicted RBP32.27■■■□□ 2.76
COPS6-210ENST00000496358 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
COPS6-210ENST00000496358 TARBP1Q13395 1621 aaKnown RBP32.21■■■□□ 2.75
COPS6-210ENST00000496358 FGD5Q6ZNL6 1462 aa32.19■■■□□ 2.74
COPS6-210ENST00000496358 SOGA1O94964 1423 aa32.16■■■□□ 2.74
COPS6-210ENST00000496358 RAD54L2Q9Y4B4 1467 aa32.15■■■□□ 2.74
COPS6-210ENST00000496358 EIF4G3O43432 1585 aaKnown RBP32.11■■■□□ 2.73
COPS6-210ENST00000496358 AQRO60306 1485 aaKnown RBP eCLIP32.06■■■□□ 2.722e-17■■■■■ 77.3
COPS6-210ENST00000496358 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
COPS6-210ENST00000496358 TDRD9Q8NDG6 1382 aaKnown RBP31.99■■■□□ 2.71
COPS6-210ENST00000496358 BIVM-ERCC5R4GMW8 1640 aa31.99■■■□□ 2.71
COPS6-210ENST00000496358 TOP2BQ02880 1626 aa31.98■■■□□ 2.71
COPS6-210ENST00000496358 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
COPS6-210ENST00000496358 WDR97A6NE52 1622 aa31.94■■■□□ 2.7
COPS6-210ENST00000496358 OSCARQ8IYS5 282 aa31.92■■■□□ 2.7
COPS6-210ENST00000496358 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
COPS6-210ENST00000496358 GRIN2BQ13224 1484 aa31.78■■■□□ 2.68
COPS6-210ENST00000496358 GAPVD1Q14C86 1478 aa31.78■■■□□ 2.68
COPS6-210ENST00000496358 CHD1O14646 1710 aa31.78■■■□□ 2.68
COPS6-210ENST00000496358 PBRM1Q86U86 1689 aa31.76■■■□□ 2.67
COPS6-210ENST00000496358 FBLN2P98095 1184 aa31.75■■■□□ 2.67
COPS6-210ENST00000496358 SNAPC4Q5SXM2 1469 aa31.75■■■□□ 2.67
COPS6-210ENST00000496358 ABCA5Q8WWZ7 1642 aa31.75■■■□□ 2.67
COPS6-210ENST00000496358 MAGI1Q96QZ7 1491 aaPredicted RBP31.7■■■□□ 2.66
COPS6-210ENST00000496358 CHMP7Q8WUX9 453 aaPredicted RBP31.63■■■□□ 2.65
COPS6-210ENST00000496358 SYNJ2O15056 1496 aa31.58■■■□□ 2.65
COPS6-210ENST00000496358 ERICH3Q5RHP9 1530 aa31.48■■■□□ 2.63
COPS6-210ENST00000496358 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
COPS6-210ENST00000496358 RIMBP3CA6NJZ7 1639 aa31.4■■■□□ 2.62
COPS6-210ENST00000496358 RIMBP3BA6NNM3 1639 aa31.4■■■□□ 2.62
COPS6-210ENST00000496358 RIMBP3Q9UFD9 1639 aa31.4■■■□□ 2.62
COPS6-210ENST00000496358 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
COPS6-210ENST00000496358 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
COPS6-210ENST00000496358 ARHGEF11O15085 1522 aa31.36■■■□□ 2.61
COPS6-210ENST00000496358 CLASP1Q7Z460 1538 aa31.36■■■□□ 2.61
COPS6-210ENST00000496358 GRIN2AQ12879 1464 aa31.36■■■□□ 2.61
COPS6-210ENST00000496358 IGF1RP08069 1367 aa31.25■■■□□ 2.59
COPS6-210ENST00000496358 CEP170Q5SW79 1584 aa31.22■■■□□ 2.59
COPS6-210ENST00000496358 NUP160Q12769 1436 aa31.21■■■□□ 2.59
COPS6-210ENST00000496358 CUL7Q14999 1698 aa31.2■■■□□ 2.59
COPS6-210ENST00000496358 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
COPS6-210ENST00000496358 ARAP1Q96P48 1450 aa31.09■■■□□ 2.57
COPS6-210ENST00000496358 CARMIL1Q5VZK9 1371 aa31.09■■■□□ 2.57
COPS6-210ENST00000496358 RUSC2Q8N2Y8 1516 aa31.07■■■□□ 2.56
COPS6-210ENST00000496358 SHROOM2Q13796 1616 aa31■■■□□ 2.55
COPS6-210ENST00000496358 TRHP20396 242 aaPredicted RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms