RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 NISCHQ9Y2I1 1504 aa44.96■■■■■ 4.79
APH1A-201ENST00000236017 ABCC9O60706 1549 aa40.32■■■■■ 4.04
APH1A-201ENST00000236017 CCDC180Q9P1Z9 1646 aa40.22■■■■■ 4.03
APH1A-201ENST00000236017 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
APH1A-201ENST00000236017 DCAF8L2P0C7V8 631 aa38.13■■■■□ 3.69
APH1A-201ENST00000236017 NACADO15069 1562 aa38.12■■■■□ 3.69
APH1A-201ENST00000236017 DNAJC5BQ9UF47 199 aa37.84■■■■□ 3.65
APH1A-201ENST00000236017 PABPN1Q86U42 306 aaKnown RBP eCLIP37.63■■■■□ 3.61
APH1A-201ENST00000236017 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
APH1A-201ENST00000236017 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
APH1A-201ENST00000236017 ZCCHC6Q5VYS8 1495 aaKnown RBP37.24■■■■□ 3.55
APH1A-201ENST00000236017 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
APH1A-201ENST00000236017 DCAF1Q9Y4B6 1507 aa37.14■■■■□ 3.54
APH1A-201ENST00000236017 SHROOM4Q9ULL8 1493 aa36.77■■■■□ 3.48
APH1A-201ENST00000236017 SCRIBQ14160 1630 aa36.68■■■■□ 3.46
APH1A-201ENST00000236017 CC2D2AQ9P2K1 1620 aa36.36■■■■□ 3.41
APH1A-201ENST00000236017 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
APH1A-201ENST00000236017 EIF4G1Q04637 1599 aaKnown RBP36.3■■■■□ 3.4
APH1A-201ENST00000236017 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
APH1A-201ENST00000236017 ATAD2BQ9ULI0 1458 aa35.12■■■■□ 3.21
APH1A-201ENST00000236017 SMARCA2P51531 1590 aa35■■■■□ 3.19
APH1A-201ENST00000236017 SMARCA4P51532 1647 aa35■■■■□ 3.19
APH1A-201ENST00000236017 BAZ1AQ9NRL2 1556 aaPredicted RBP34.9■■■■□ 3.18
APH1A-201ENST00000236017 HMGXB3Q12766 1538 aa34.9■■■■□ 3.18
APH1A-201ENST00000236017 ERCC6Q03468 1493 aa34.84■■■■□ 3.17
APH1A-201ENST00000236017 DNAJC5Q9H3Z4 198 aa34.79■■■■□ 3.16
APH1A-201ENST00000236017 BAZ1BQ9UIG0 1483 aaKnown RBP34.78■■■■□ 3.16
APH1A-201ENST00000236017 CUX2O14529 1486 aa34.75■■■■□ 3.15
APH1A-201ENST00000236017 PEG3Q9GZU2 1588 aa34.67■■■■□ 3.14
APH1A-201ENST00000236017 MROH2BQ7Z745 1585 aa34.62■■■■□ 3.13
APH1A-201ENST00000236017 NESP48681 1621 aa34.61■■■■□ 3.13
APH1A-201ENST00000236017 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
APH1A-201ENST00000236017 PDS5BQ9NTI5 1447 aa34.3■■■■□ 3.08
APH1A-201ENST00000236017 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
APH1A-201ENST00000236017 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
APH1A-201ENST00000236017 WIZO95785 1651 aa34.15■■■■□ 3.06
APH1A-201ENST00000236017 KIF21AQ7Z4S6 1674 aa34.04■■■■□ 3.04
APH1A-201ENST00000236017 RSF1Q96T23 1441 aaPredicted RBP33.98■■■■□ 3.03
APH1A-201ENST00000236017 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
APH1A-201ENST00000236017 CEP164Q9UPV0 1460 aa33.79■■■■□ 3
APH1A-201ENST00000236017 CFTRP13569 1480 aa33.78■■■■□ 3
APH1A-201ENST00000236017 WDR62O43379 1518 aa33.78■■■■□ 3
APH1A-201ENST00000236017 TOP2AP11388 1531 aaKnown RBP33.78■■■■□ 3
APH1A-201ENST00000236017 FANCD2Q9BXW9 1451 aa33.76■■■■□ 3
APH1A-201ENST00000236017 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
APH1A-201ENST00000236017 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
APH1A-201ENST00000236017 OSCARQ8IYS5 282 aa33.31■■■□□ 2.92
APH1A-201ENST00000236017 TRIM41Q8WV44 630 aa33.28■■■□□ 2.92
APH1A-201ENST00000236017 PRDM2Q13029 1718 aa33.21■■■□□ 2.91
APH1A-201ENST00000236017 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
APH1A-201ENST00000236017 ABCC8Q09428 1581 aa33.11■■■□□ 2.89
APH1A-201ENST00000236017 TOPBP1Q92547 1522 aa33.11■■■□□ 2.89
APH1A-201ENST00000236017 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
APH1A-201ENST00000236017 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
APH1A-201ENST00000236017 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.84
APH1A-201ENST00000236017 EIF4G3O43432 1585 aaKnown RBP32.78■■■□□ 2.84
APH1A-201ENST00000236017 POLA1P09884 1462 aaPredicted RBP32.77■■■□□ 2.84
APH1A-201ENST00000236017 TARBP1Q13395 1621 aaKnown RBP32.73■■■□□ 2.83
APH1A-201ENST00000236017 SOGA1O94964 1423 aa32.71■■■□□ 2.83
APH1A-201ENST00000236017 FBLN2P98095 1184 aa32.68■■■□□ 2.82
APH1A-201ENST00000236017 RAD54L2Q9Y4B4 1467 aa32.67■■■□□ 2.82
APH1A-201ENST00000236017 RIMBP3CA6NJZ7 1639 aa32.65■■■□□ 2.82
APH1A-201ENST00000236017 RIMBP3BA6NNM3 1639 aa32.65■■■□□ 2.82
APH1A-201ENST00000236017 RIMBP3Q9UFD9 1639 aa32.65■■■□□ 2.82
APH1A-201ENST00000236017 TDRD9Q8NDG6 1382 aaKnown RBP32.63■■■□□ 2.81
APH1A-201ENST00000236017 SUPT5HO00267 1087 aaKnown RBP32.61■■■□□ 2.81
APH1A-201ENST00000236017 ARHGEF11O15085 1522 aa32.6■■■□□ 2.81
APH1A-201ENST00000236017 FGD5Q6ZNL6 1462 aa32.57■■■□□ 2.8
APH1A-201ENST00000236017 CUX1P39880 1505 aa32.51■■■□□ 2.8
APH1A-201ENST00000236017 CYB5RLQ6IPT4 315 aa32.5■■■□□ 2.79
APH1A-201ENST00000236017 CHD1O14646 1710 aa32.47■■■□□ 2.79
APH1A-201ENST00000236017 CHMP7Q8WUX9 453 aaPredicted RBP32.45■■■□□ 2.79
APH1A-201ENST00000236017 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
APH1A-201ENST00000236017 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
APH1A-201ENST00000236017 GRIN2BQ13224 1484 aa32.38■■■□□ 2.77
APH1A-201ENST00000236017 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
APH1A-201ENST00000236017 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
APH1A-201ENST00000236017 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
APH1A-201ENST00000236017 SYNJ2O15056 1496 aa32.25■■■□□ 2.75
APH1A-201ENST00000236017 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
APH1A-201ENST00000236017 ABCA10Q8WWZ4 1543 aa32.22■■■□□ 2.75
APH1A-201ENST00000236017 CLASP1Q7Z460 1538 aa32.19■■■□□ 2.74
APH1A-201ENST00000236017 TRHP20396 242 aaPredicted RBP32.16■■■□□ 2.74
APH1A-201ENST00000236017 WRNQ14191 1432 aaPredicted RBP eCLIP32.16■■■□□ 2.74
APH1A-201ENST00000236017 PBRM1Q86U86 1689 aa32.07■■■□□ 2.72
APH1A-201ENST00000236017 ABCA5Q8WWZ7 1642 aa32.07■■■□□ 2.72
APH1A-201ENST00000236017 TOP2BQ02880 1626 aa31.99■■■□□ 2.71
APH1A-201ENST00000236017 BIVM-ERCC5R4GMW8 1640 aa31.94■■■□□ 2.7
APH1A-201ENST00000236017 GRIN2AQ12879 1464 aa31.93■■■□□ 2.7
APH1A-201ENST00000236017 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
APH1A-201ENST00000236017 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
APH1A-201ENST00000236017 NUP160Q12769 1436 aa31.83■■■□□ 2.69
APH1A-201ENST00000236017 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
APH1A-201ENST00000236017 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
APH1A-201ENST00000236017 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
APH1A-201ENST00000236017 JPH4Q96JJ6 628 aa31.64■■■□□ 2.66
APH1A-201ENST00000236017 SHROOM2Q13796 1616 aa31.59■■■□□ 2.65
APH1A-201ENST00000236017 PRG4Q92954 1404 aaPredicted RBP31.57■■■□□ 2.64
APH1A-201ENST00000236017 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
APH1A-201ENST00000236017 IGF1RP08069 1367 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms