RNA–Protein interactions for RNA: ENST00000418625.5

COPS6-202, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COPS6, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-202ENST00000418625 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
COPS6-202ENST00000418625 CCDC180Q9P1Z9 1646 aa34.46■■■■□ 3.11
COPS6-202ENST00000418625 ABCC9O60706 1549 aa34.45■■■■□ 3.1
COPS6-202ENST00000418625 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
COPS6-202ENST00000418625 NACADO15069 1562 aa32.56■■■□□ 2.8
COPS6-202ENST00000418625 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
COPS6-202ENST00000418625 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
COPS6-202ENST00000418625 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
COPS6-202ENST00000418625 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
COPS6-202ENST00000418625 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
COPS6-202ENST00000418625 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
COPS6-202ENST00000418625 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
COPS6-202ENST00000418625 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
COPS6-202ENST00000418625 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
COPS6-202ENST00000418625 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
COPS6-202ENST00000418625 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
COPS6-202ENST00000418625 EIF4G1Q04637 1599 aaKnown RBP31.04■■■□□ 2.56
COPS6-202ENST00000418625 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
COPS6-202ENST00000418625 NCAPD3P42695 1498 aa30■■■□□ 2.39
COPS6-202ENST00000418625 SMARCA4P51532 1647 aa29.93■■■□□ 2.38
COPS6-202ENST00000418625 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
COPS6-202ENST00000418625 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
COPS6-202ENST00000418625 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
COPS6-202ENST00000418625 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
COPS6-202ENST00000418625 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
COPS6-202ENST00000418625 DNAJC5Q9H3Z4 198 aa29.71■■■□□ 2.35
COPS6-202ENST00000418625 CUX2O14529 1486 aa29.7■■■□□ 2.35
COPS6-202ENST00000418625 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
COPS6-202ENST00000418625 PEG3Q9GZU2 1588 aa29.59■■■□□ 2.33
COPS6-202ENST00000418625 NESP48681 1621 aa29.56■■■□□ 2.32
COPS6-202ENST00000418625 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
COPS6-202ENST00000418625 LAMC3Q9Y6N6 1575 aa29.4■■■□□ 2.3
COPS6-202ENST00000418625 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
COPS6-202ENST00000418625 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
COPS6-202ENST00000418625 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
COPS6-202ENST00000418625 WIZO95785 1651 aa29.21■■■□□ 2.27
COPS6-202ENST00000418625 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
COPS6-202ENST00000418625 MRC2Q9UBG0 1479 aa28.96■■■□□ 2.23
COPS6-202ENST00000418625 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
COPS6-202ENST00000418625 WDR62O43379 1518 aa28.86■■■□□ 2.21
COPS6-202ENST00000418625 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
COPS6-202ENST00000418625 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
COPS6-202ENST00000418625 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
COPS6-202ENST00000418625 CFTRP13569 1480 aa28.75■■■□□ 2.19
COPS6-202ENST00000418625 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
COPS6-202ENST00000418625 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
COPS6-202ENST00000418625 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
COPS6-202ENST00000418625 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
COPS6-202ENST00000418625 OSCARQ8IYS5 282 aa28.38■■■□□ 2.13
COPS6-202ENST00000418625 IFT140Q96RY7 1462 aa28.26■■■□□ 2.11
COPS6-202ENST00000418625 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
COPS6-202ENST00000418625 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
COPS6-202ENST00000418625 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
COPS6-202ENST00000418625 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
COPS6-202ENST00000418625 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
COPS6-202ENST00000418625 RIMBP3CA6NJZ7 1639 aa28.01■■■□□ 2.07
COPS6-202ENST00000418625 RIMBP3BA6NNM3 1639 aa28.01■■■□□ 2.07
COPS6-202ENST00000418625 RIMBP3Q9UFD9 1639 aa28.01■■■□□ 2.07
COPS6-202ENST00000418625 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
COPS6-202ENST00000418625 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.063e-14■■■■■ 70.9
COPS6-202ENST00000418625 CHD1O14646 1710 aa27.94■■■□□ 2.06
COPS6-202ENST00000418625 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
COPS6-202ENST00000418625 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
COPS6-202ENST00000418625 FBLN2P98095 1184 aa27.86■■■□□ 2.05
COPS6-202ENST00000418625 SOGA1O94964 1423 aa27.84■■■□□ 2.05
COPS6-202ENST00000418625 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
COPS6-202ENST00000418625 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
COPS6-202ENST00000418625 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
COPS6-202ENST00000418625 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
COPS6-202ENST00000418625 CUX1P39880 1505 aa27.72■■■□□ 2.03
COPS6-202ENST00000418625 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
COPS6-202ENST00000418625 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
COPS6-202ENST00000418625 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
COPS6-202ENST00000418625 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
COPS6-202ENST00000418625 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
COPS6-202ENST00000418625 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
COPS6-202ENST00000418625 ARAP1Q96P48 1450 aa27.57■■■□□ 2
COPS6-202ENST00000418625 SYNJ1O43426 1573 aa27.57■■■□□ 2
COPS6-202ENST00000418625 PBRM1Q86U86 1689 aa27.57■■■□□ 2
COPS6-202ENST00000418625 CLASP1Q7Z460 1538 aa27.51■■■□□ 2
COPS6-202ENST00000418625 SYNJ2O15056 1496 aa27.51■■■□□ 2
COPS6-202ENST00000418625 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
COPS6-202ENST00000418625 TRHP20396 242 aaPredicted RBP27.49■■□□□ 1.99
COPS6-202ENST00000418625 ABCA10Q8WWZ4 1543 aa27.44■■□□□ 1.98
COPS6-202ENST00000418625 ABCA5Q8WWZ7 1642 aa27.42■■□□□ 1.98
COPS6-202ENST00000418625 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
COPS6-202ENST00000418625 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
COPS6-202ENST00000418625 TOP2BQ02880 1626 aa27.31■■□□□ 1.96
COPS6-202ENST00000418625 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
COPS6-202ENST00000418625 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
COPS6-202ENST00000418625 FHAD1B1AJZ9 1412 aa27.15■■□□□ 1.94
COPS6-202ENST00000418625 CEP170Q5SW79 1584 aa27.14■■□□□ 1.93
COPS6-202ENST00000418625 ERICH3Q5RHP9 1530 aa27.13■■□□□ 1.93
COPS6-202ENST00000418625 NUP160Q12769 1436 aa27.1■■□□□ 1.93
COPS6-202ENST00000418625 ERCC6L2Q5T890 1561 aa27.07■■□□□ 1.92
COPS6-202ENST00000418625 SHROOM2Q13796 1616 aa27.03■■□□□ 1.92
COPS6-202ENST00000418625 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
COPS6-202ENST00000418625 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
COPS6-202ENST00000418625 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
COPS6-202ENST00000418625 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms