RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 NISCHQ9Y2I1 1504 aa46.32■■■■■ 5.01
AUP1-201ENST00000377526 CCDC180Q9P1Z9 1646 aa40.88■■■■■ 4.13
AUP1-201ENST00000377526 ABCC9O60706 1549 aa39.37■■■■□ 3.89
AUP1-201ENST00000377526 ZCCHC6Q5VYS8 1495 aaKnown RBP38.75■■■■□ 3.79
AUP1-201ENST00000377526 DCAF8L2P0C7V8 631 aa38.38■■■■□ 3.73
AUP1-201ENST00000377526 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.73
AUP1-201ENST00000377526 NACADO15069 1562 aa38.24■■■■□ 3.71
AUP1-201ENST00000377526 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
AUP1-201ENST00000377526 RB1CC1Q8TDY2 1594 aa38.12■■■■□ 3.69
AUP1-201ENST00000377526 SCRIBQ14160 1630 aa37.41■■■■□ 3.58
AUP1-201ENST00000377526 UNC13AQ9UPW8 1703 aa37.38■■■■□ 3.57
AUP1-201ENST00000377526 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
AUP1-201ENST00000377526 BICRAQ9NZM4 1560 aa37.02■■■■□ 3.52
AUP1-201ENST00000377526 PABPN1Q86U42 306 aaKnown RBP eCLIP36.9■■■■□ 3.53e-7■■□□□ 14.3
AUP1-201ENST00000377526 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
AUP1-201ENST00000377526 EIF4G1Q04637 1599 aaKnown RBP35.96■■■■□ 3.35
AUP1-201ENST00000377526 BAZ1AQ9NRL2 1556 aaPredicted RBP35.84■■■■□ 3.33
AUP1-201ENST00000377526 SMARCA4P51532 1647 aa35.82■■■■□ 3.33
AUP1-201ENST00000377526 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
AUP1-201ENST00000377526 CC2D2AQ9P2K1 1620 aa35.65■■■■□ 3.3
AUP1-201ENST00000377526 RSF1Q96T23 1441 aaPredicted RBP35.56■■■■□ 3.28
AUP1-201ENST00000377526 DNAJC5BQ9UF47 199 aa35.52■■■■□ 3.28
AUP1-201ENST00000377526 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
AUP1-201ENST00000377526 ATAD2BQ9ULI0 1458 aa35.43■■■■□ 3.26
AUP1-201ENST00000377526 WIZO95785 1651 aa35.42■■■■□ 3.26
AUP1-201ENST00000377526 SMARCA2P51531 1590 aa35.39■■■■□ 3.26
AUP1-201ENST00000377526 NCAPD3P42695 1498 aa35.27■■■■□ 3.24
AUP1-201ENST00000377526 HMGXB3Q12766 1538 aa35.19■■■■□ 3.22
AUP1-201ENST00000377526 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
AUP1-201ENST00000377526 SUPT5HO00267 1087 aaKnown RBP35.15■■■■□ 3.22
AUP1-201ENST00000377526 TOP2AP11388 1531 aaKnown RBP35.03■■■■□ 3.2
AUP1-201ENST00000377526 CCDC88BA6NC98 1476 aa34.62■■■■□ 3.13
AUP1-201ENST00000377526 NESP48681 1621 aa34.3■■■■□ 3.08
AUP1-201ENST00000377526 CADPSQ9ULU8 1353 aa34.28■■■■□ 3.08
AUP1-201ENST00000377526 LAMC3Q9Y6N6 1575 aa34.25■■■■□ 3.07
AUP1-201ENST00000377526 CFTRP13569 1480 aa34.24■■■■□ 3.07
AUP1-201ENST00000377526 PRDM2Q13029 1718 aa34.09■■■■□ 3.05
AUP1-201ENST00000377526 PDS5BQ9NTI5 1447 aa33.96■■■■□ 3.03
AUP1-201ENST00000377526 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
AUP1-201ENST00000377526 FANCD2Q9BXW9 1451 aa33.91■■■■□ 3.02
AUP1-201ENST00000377526 ERCC6Q03468 1493 aa33.83■■■■□ 3.01
AUP1-201ENST00000377526 CEP164Q9UPV0 1460 aa33.8■■■■□ 3
AUP1-201ENST00000377526 THOC2Q8NI27 1593 aaKnown RBP33.63■■■□□ 2.97
AUP1-201ENST00000377526 ABCC8Q09428 1581 aa33.61■■■□□ 2.97
AUP1-201ENST00000377526 MRC2Q9UBG0 1479 aa33.61■■■□□ 2.97
AUP1-201ENST00000377526 URB2Q14146 1524 aaKnown RBP33.57■■■□□ 2.96
AUP1-201ENST00000377526 WDR62O43379 1518 aa33.49■■■□□ 2.95
AUP1-201ENST00000377526 CUX1P39880 1505 aa33.49■■■□□ 2.95
AUP1-201ENST00000377526 WRNQ14191 1432 aaPredicted RBP eCLIP33.48■■■□□ 2.95
AUP1-201ENST00000377526 DNMBPQ6XZF7 1577 aa33.48■■■□□ 2.95
AUP1-201ENST00000377526 TOPBP1Q92547 1522 aa33.46■■■□□ 2.95
AUP1-201ENST00000377526 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
AUP1-201ENST00000377526 BIVM-ERCC5R4GMW8 1640 aa33.37■■■□□ 2.93
AUP1-201ENST00000377526 TOP2BQ02880 1626 aa33.37■■■□□ 2.93
AUP1-201ENST00000377526 FGD5Q6ZNL6 1462 aa33.25■■■□□ 2.91
AUP1-201ENST00000377526 POLA1P09884 1462 aaPredicted RBP33.23■■■□□ 2.91
AUP1-201ENST00000377526 CHIC1Q5VXU3 224 aa33.22■■■□□ 2.91
AUP1-201ENST00000377526 CUX2O14529 1486 aa33.21■■■□□ 2.91
AUP1-201ENST00000377526 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
AUP1-201ENST00000377526 RAD54L2Q9Y4B4 1467 aa33.1■■■□□ 2.89
AUP1-201ENST00000377526 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
AUP1-201ENST00000377526 SOGA1O94964 1423 aa33.07■■■□□ 2.88
AUP1-201ENST00000377526 IFT140Q96RY7 1462 aa33.04■■■□□ 2.88
AUP1-201ENST00000377526 WDR97A6NE52 1622 aa32.99■■■□□ 2.87
AUP1-201ENST00000377526 ABCA10Q8WWZ4 1543 aa32.94■■■□□ 2.86
AUP1-201ENST00000377526 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
AUP1-201ENST00000377526 TDRD9Q8NDG6 1382 aaKnown RBP32.82■■■□□ 2.84
AUP1-201ENST00000377526 EIF4G3O43432 1585 aaKnown RBP32.81■■■□□ 2.84
AUP1-201ENST00000377526 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
AUP1-201ENST00000377526 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.843e-11■■■■■ 56
AUP1-201ENST00000377526 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
AUP1-201ENST00000377526 GAPVD1Q14C86 1478 aa32.71■■■□□ 2.83
AUP1-201ENST00000377526 KIF27Q86VH2 1401 aa32.7■■■□□ 2.83
AUP1-201ENST00000377526 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
AUP1-201ENST00000377526 GRIN2BQ13224 1484 aa32.6■■■□□ 2.81
AUP1-201ENST00000377526 ERICH3Q5RHP9 1530 aa32.55■■■□□ 2.8
AUP1-201ENST00000377526 EEA1Q15075 1411 aa32.51■■■□□ 2.8
AUP1-201ENST00000377526 IGF1RP08069 1367 aa32.51■■■□□ 2.79
AUP1-201ENST00000377526 SNAPC4Q5SXM2 1469 aa32.5■■■□□ 2.79
AUP1-201ENST00000377526 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
AUP1-201ENST00000377526 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
AUP1-201ENST00000377526 ADAMTS12P58397 1594 aa32.42■■■□□ 2.78
AUP1-201ENST00000377526 CUL7Q14999 1698 aa32.41■■■□□ 2.78
AUP1-201ENST00000377526 CSRNP3Q8WYN3 585 aa32.38■■■□□ 2.77
AUP1-201ENST00000377526 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
AUP1-201ENST00000377526 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.76
AUP1-201ENST00000377526 SYNJ2O15056 1496 aa32.31■■■□□ 2.76
AUP1-201ENST00000377526 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
AUP1-201ENST00000377526 CHD1O14646 1710 aa32.28■■■□□ 2.76
AUP1-201ENST00000377526 RAPGEF2Q9Y4G8 1499 aa32.21■■■□□ 2.75
AUP1-201ENST00000377526 GRIN2AQ12879 1464 aa32.21■■■□□ 2.75
AUP1-201ENST00000377526 FBLN2P98095 1184 aa32.21■■■□□ 2.75
AUP1-201ENST00000377526 CHMP7Q8WUX9 453 aaPredicted RBP32.21■■■□□ 2.75
AUP1-201ENST00000377526 KIF21BO75037 1637 aa32.2■■■□□ 2.74
AUP1-201ENST00000377526 CEP170Q5SW79 1584 aa32.06■■■□□ 2.72
AUP1-201ENST00000377526 EHMT2Q96KQ7 1210 aa32.05■■■□□ 2.72
AUP1-201ENST00000377526 GOLGA3Q08378 1498 aa32.04■■■□□ 2.72
AUP1-201ENST00000377526 NUP160Q12769 1436 aa32.03■■■□□ 2.72
AUP1-201ENST00000377526 CTTNBP2Q8WZ74 1663 aa31.93■■■□□ 2.7
AUP1-201ENST00000377526 OSCARQ8IYS5 282 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms