RNA–Protein interactions for RNA: ENST00000483872.2

FGFR4-206, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 3

Gene FGFR4, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-206ENST00000483872 NISCHQ9Y2I1 1504 aa28.39■■■□□ 2.14
FGFR4-206ENST00000483872 CCDC180Q9P1Z9 1646 aa25.35■■□□□ 1.65
FGFR4-206ENST00000483872 ABCC9O60706 1549 aa25.03■■□□□ 1.6
FGFR4-206ENST00000483872 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
FGFR4-206ENST00000483872 NACADO15069 1562 aa23.88■■□□□ 1.41
FGFR4-206ENST00000483872 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
FGFR4-206ENST00000483872 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
FGFR4-206ENST00000483872 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
FGFR4-206ENST00000483872 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
FGFR4-206ENST00000483872 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
FGFR4-206ENST00000483872 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
FGFR4-206ENST00000483872 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
FGFR4-206ENST00000483872 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
FGFR4-206ENST00000483872 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
FGFR4-206ENST00000483872 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
FGFR4-206ENST00000483872 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
FGFR4-206ENST00000483872 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.22
FGFR4-206ENST00000483872 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
FGFR4-206ENST00000483872 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
FGFR4-206ENST00000483872 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
FGFR4-206ENST00000483872 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
FGFR4-206ENST00000483872 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
FGFR4-206ENST00000483872 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
FGFR4-206ENST00000483872 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
FGFR4-206ENST00000483872 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
FGFR4-206ENST00000483872 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
FGFR4-206ENST00000483872 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
FGFR4-206ENST00000483872 WIZO95785 1651 aa21.63■■□□□ 1.05
FGFR4-206ENST00000483872 NESP48681 1621 aa21.61■■□□□ 1.05
FGFR4-206ENST00000483872 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
FGFR4-206ENST00000483872 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
FGFR4-206ENST00000483872 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
FGFR4-206ENST00000483872 CUX2O14529 1486 aa21.46■■□□□ 1.03
FGFR4-206ENST00000483872 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
FGFR4-206ENST00000483872 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
FGFR4-206ENST00000483872 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
FGFR4-206ENST00000483872 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
FGFR4-206ENST00000483872 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
FGFR4-206ENST00000483872 CFTRP13569 1480 aa21.22■□□□□ 0.99
FGFR4-206ENST00000483872 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
FGFR4-206ENST00000483872 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
FGFR4-206ENST00000483872 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
FGFR4-206ENST00000483872 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
FGFR4-206ENST00000483872 WDR62O43379 1518 aa21.12■□□□□ 0.97
FGFR4-206ENST00000483872 DNAJC5Q9H3Z4 198 aa21.08■□□□□ 0.97
FGFR4-206ENST00000483872 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
FGFR4-206ENST00000483872 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
FGFR4-206ENST00000483872 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
FGFR4-206ENST00000483872 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
FGFR4-206ENST00000483872 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
FGFR4-206ENST00000483872 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
FGFR4-206ENST00000483872 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
FGFR4-206ENST00000483872 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
FGFR4-206ENST00000483872 POLA1P09884 1462 aaPredicted RBP20.59■□□□□ 0.89
FGFR4-206ENST00000483872 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
FGFR4-206ENST00000483872 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
FGFR4-206ENST00000483872 CUX1P39880 1505 aa20.54■□□□□ 0.88
FGFR4-206ENST00000483872 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
FGFR4-206ENST00000483872 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
FGFR4-206ENST00000483872 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
FGFR4-206ENST00000483872 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.871e-12■■□□□ 13.6
FGFR4-206ENST00000483872 SOGA1O94964 1423 aa20.48■□□□□ 0.87
FGFR4-206ENST00000483872 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
FGFR4-206ENST00000483872 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
FGFR4-206ENST00000483872 CHD1O14646 1710 aa20.33■□□□□ 0.85
FGFR4-206ENST00000483872 WRNQ14191 1432 aaPredicted RBP eCLIP20.3■□□□□ 0.84
FGFR4-206ENST00000483872 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
FGFR4-206ENST00000483872 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
FGFR4-206ENST00000483872 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
FGFR4-206ENST00000483872 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
FGFR4-206ENST00000483872 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
FGFR4-206ENST00000483872 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
FGFR4-206ENST00000483872 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
FGFR4-206ENST00000483872 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
FGFR4-206ENST00000483872 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
FGFR4-206ENST00000483872 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
FGFR4-206ENST00000483872 FBLN2P98095 1184 aa20.24■□□□□ 0.83
FGFR4-206ENST00000483872 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
FGFR4-206ENST00000483872 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
FGFR4-206ENST00000483872 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
FGFR4-206ENST00000483872 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
FGFR4-206ENST00000483872 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
FGFR4-206ENST00000483872 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
FGFR4-206ENST00000483872 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
FGFR4-206ENST00000483872 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
FGFR4-206ENST00000483872 ADAMTS12P58397 1594 aa20.08■□□□□ 0.8
FGFR4-206ENST00000483872 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
FGFR4-206ENST00000483872 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
FGFR4-206ENST00000483872 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
FGFR4-206ENST00000483872 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
FGFR4-206ENST00000483872 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
FGFR4-206ENST00000483872 NUP160Q12769 1436 aa19.96■□□□□ 0.79
FGFR4-206ENST00000483872 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
FGFR4-206ENST00000483872 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
FGFR4-206ENST00000483872 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
FGFR4-206ENST00000483872 IGF1RP08069 1367 aa19.84■□□□□ 0.77
FGFR4-206ENST00000483872 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
FGFR4-206ENST00000483872 CUL7Q14999 1698 aa19.81■□□□□ 0.76
FGFR4-206ENST00000483872 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
FGFR4-206ENST00000483872 PRG4Q92954 1404 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms