RNA–Protein interactions for RNA: ENST00000599658.1

LSR-208, Transcript of lipolysis stimulated lipoprotein receptor, humanhuman

TSL 3

Gene LSR, Length 343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSR-208ENST00000599658 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
LSR-208ENST00000599658 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
LSR-208ENST00000599658 ABCC9O60706 1549 aa26.39■■□□□ 1.81
LSR-208ENST00000599658 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
LSR-208ENST00000599658 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
LSR-208ENST00000599658 NACADO15069 1562 aa24.96■■□□□ 1.59
LSR-208ENST00000599658 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
LSR-208ENST00000599658 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
LSR-208ENST00000599658 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
LSR-208ENST00000599658 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
LSR-208ENST00000599658 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
LSR-208ENST00000599658 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
LSR-208ENST00000599658 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
LSR-208ENST00000599658 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
LSR-208ENST00000599658 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
LSR-208ENST00000599658 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
LSR-208ENST00000599658 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
LSR-208ENST00000599658 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
LSR-208ENST00000599658 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
LSR-208ENST00000599658 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
LSR-208ENST00000599658 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
LSR-208ENST00000599658 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
LSR-208ENST00000599658 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
LSR-208ENST00000599658 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
LSR-208ENST00000599658 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
LSR-208ENST00000599658 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
LSR-208ENST00000599658 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
LSR-208ENST00000599658 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
LSR-208ENST00000599658 NESP48681 1621 aa22.73■■□□□ 1.23
LSR-208ENST00000599658 WIZO95785 1651 aa22.6■■□□□ 1.21
LSR-208ENST00000599658 CUX2O14529 1486 aa22.6■■□□□ 1.21
LSR-208ENST00000599658 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
LSR-208ENST00000599658 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
LSR-208ENST00000599658 THOC2Q8NI27 1593 aaKnown RBP22.44■■□□□ 1.18
LSR-208ENST00000599658 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
LSR-208ENST00000599658 RSF1Q96T23 1441 aaPredicted RBP22.36■■□□□ 1.17
LSR-208ENST00000599658 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
LSR-208ENST00000599658 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
LSR-208ENST00000599658 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
LSR-208ENST00000599658 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
LSR-208ENST00000599658 WDR62O43379 1518 aa22.13■■□□□ 1.13
LSR-208ENST00000599658 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
LSR-208ENST00000599658 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
LSR-208ENST00000599658 CFTRP13569 1480 aa22.12■■□□□ 1.13
LSR-208ENST00000599658 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
LSR-208ENST00000599658 PRDM2Q13029 1718 aa22■■□□□ 1.11
LSR-208ENST00000599658 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
LSR-208ENST00000599658 TOPBP1Q92547 1522 aa21.73■■□□□ 1.07
LSR-208ENST00000599658 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
LSR-208ENST00000599658 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
LSR-208ENST00000599658 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
LSR-208ENST00000599658 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
LSR-208ENST00000599658 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
LSR-208ENST00000599658 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
LSR-208ENST00000599658 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
LSR-208ENST00000599658 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
LSR-208ENST00000599658 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
LSR-208ENST00000599658 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.03
LSR-208ENST00000599658 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.034e-7■■■□□ 17.7
LSR-208ENST00000599658 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
LSR-208ENST00000599658 CUX1P39880 1505 aa21.43■■□□□ 1.02
LSR-208ENST00000599658 CHD1O14646 1710 aa21.43■■□□□ 1.02
LSR-208ENST00000599658 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
LSR-208ENST00000599658 SOGA1O94964 1423 aa21.41■■□□□ 1.02
LSR-208ENST00000599658 RIMBP3CA6NJZ7 1639 aa21.39■■□□□ 1.01
LSR-208ENST00000599658 RIMBP3BA6NNM3 1639 aa21.39■■□□□ 1.01
LSR-208ENST00000599658 RIMBP3Q9UFD9 1639 aa21.39■■□□□ 1.01
LSR-208ENST00000599658 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
LSR-208ENST00000599658 FBLN2P98095 1184 aa21.33■■□□□ 1.01
LSR-208ENST00000599658 ARHGEF11O15085 1522 aa21.3■■□□□ 1
LSR-208ENST00000599658 WDR97A6NE52 1622 aa21.28■■□□□ 1
LSR-208ENST00000599658 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
LSR-208ENST00000599658 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
LSR-208ENST00000599658 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
LSR-208ENST00000599658 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
LSR-208ENST00000599658 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
LSR-208ENST00000599658 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
LSR-208ENST00000599658 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.98
LSR-208ENST00000599658 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.97
LSR-208ENST00000599658 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
LSR-208ENST00000599658 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
LSR-208ENST00000599658 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
LSR-208ENST00000599658 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
LSR-208ENST00000599658 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
LSR-208ENST00000599658 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
LSR-208ENST00000599658 SYNJ2O15056 1496 aa21.1■□□□□ 0.97
LSR-208ENST00000599658 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
LSR-208ENST00000599658 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
LSR-208ENST00000599658 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
LSR-208ENST00000599658 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
LSR-208ENST00000599658 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
LSR-208ENST00000599658 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
LSR-208ENST00000599658 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
LSR-208ENST00000599658 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
LSR-208ENST00000599658 NUP160Q12769 1436 aa20.84■□□□□ 0.93
LSR-208ENST00000599658 SHROOM2Q13796 1616 aa20.77■□□□□ 0.92
LSR-208ENST00000599658 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
LSR-208ENST00000599658 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
LSR-208ENST00000599658 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
LSR-208ENST00000599658 IGF1RP08069 1367 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms