Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
BLOC1S4Q9NUP1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.52■■■□□ 2
BLOC1S4Q9NUP1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
BLOC1S4Q9NUP1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
BLOC1S4Q9NUP1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.52■■■□□ 2
BLOC1S4Q9NUP1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
BLOC1S4Q9NUP1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
BLOC1S4Q9NUP1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.5■■□□□ 1.99
BLOC1S4Q9NUP1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
BLOC1S4Q9NUP1 AC060814.1-201ENST00000554326 538 ntBASIC27.5■■□□□ 1.99
BLOC1S4Q9NUP1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
BLOC1S4Q9NUP1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 AL359504.2-201ENST00000605506 1601 ntBASIC27.49■■□□□ 1.99
BLOC1S4Q9NUP1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
BLOC1S4Q9NUP1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
BLOC1S4Q9NUP1 AC126177.7-201ENST00000547904 679 ntBASIC27.48■■□□□ 1.99
BLOC1S4Q9NUP1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BLOC1S4Q9NUP1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.48■■□□□ 1.99
BLOC1S4Q9NUP1 AL157400.5-201ENST00000507624 621 ntBASIC27.47■■□□□ 1.99
BLOC1S4Q9NUP1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.47■■□□□ 1.99
BLOC1S4Q9NUP1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
BLOC1S4Q9NUP1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.46■■□□□ 1.99
BLOC1S4Q9NUP1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
BLOC1S4Q9NUP1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.46■■□□□ 1.99
BLOC1S4Q9NUP1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
BLOC1S4Q9NUP1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.45■■□□□ 1.98
BLOC1S4Q9NUP1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.44■■□□□ 1.98
BLOC1S4Q9NUP1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
BLOC1S4Q9NUP1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
BLOC1S4Q9NUP1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
BLOC1S4Q9NUP1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.43■■□□□ 1.98
BLOC1S4Q9NUP1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
BLOC1S4Q9NUP1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.42■■□□□ 1.98
BLOC1S4Q9NUP1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.42■■□□□ 1.98
BLOC1S4Q9NUP1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
BLOC1S4Q9NUP1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
BLOC1S4Q9NUP1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.42■■□□□ 1.98
BLOC1S4Q9NUP1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
BLOC1S4Q9NUP1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
BLOC1S4Q9NUP1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
BLOC1S4Q9NUP1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.41■■□□□ 1.98
BLOC1S4Q9NUP1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.41■■□□□ 1.98
BLOC1S4Q9NUP1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
BLOC1S4Q9NUP1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.4■■□□□ 1.98
BLOC1S4Q9NUP1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
BLOC1S4Q9NUP1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 AC092296.2-201ENST00000589470 999 ntBASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
BLOC1S4Q9NUP1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
BLOC1S4Q9NUP1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.39■■□□□ 1.97
BLOC1S4Q9NUP1 AC091060.1-201ENST00000623524 1766 ntBASIC27.38■■□□□ 1.97
BLOC1S4Q9NUP1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
BLOC1S4Q9NUP1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
BLOC1S4Q9NUP1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
BLOC1S4Q9NUP1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BLOC1S4Q9NUP1 AC022413.1-201ENST00000624602 984 ntBASIC27.37■■□□□ 1.97
BLOC1S4Q9NUP1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BLOC1S4Q9NUP1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BLOC1S4Q9NUP1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
BLOC1S4Q9NUP1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
BLOC1S4Q9NUP1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.36■■□□□ 1.97
BLOC1S4Q9NUP1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BLOC1S4Q9NUP1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BLOC1S4Q9NUP1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
BLOC1S4Q9NUP1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
BLOC1S4Q9NUP1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BLOC1S4Q9NUP1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.34■■□□□ 1.97
BLOC1S4Q9NUP1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BLOC1S4Q9NUP1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
BLOC1S4Q9NUP1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
BLOC1S4Q9NUP1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.33■■□□□ 1.97
BLOC1S4Q9NUP1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.33■■□□□ 1.97
BLOC1S4Q9NUP1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
BLOC1S4Q9NUP1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
BLOC1S4Q9NUP1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
BLOC1S4Q9NUP1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.32■■□□□ 1.96
BLOC1S4Q9NUP1 AC025884.2-201ENST00000553429 711 ntBASIC27.32■■□□□ 1.96
BLOC1S4Q9NUP1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
BLOC1S4Q9NUP1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
BLOC1S4Q9NUP1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BLOC1S4Q9NUP1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.31■■□□□ 1.96
BLOC1S4Q9NUP1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
BLOC1S4Q9NUP1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BLOC1S4Q9NUP1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BLOC1S4Q9NUP1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
BLOC1S4Q9NUP1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
BLOC1S4Q9NUP1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.3■■□□□ 1.96
BLOC1S4Q9NUP1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms