Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NAF1Q96HR8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.5■■□□□ 1.51
NAF1Q96HR8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.5■■□□□ 1.51
NAF1Q96HR8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.5■■□□□ 1.51
NAF1Q96HR8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
NAF1Q96HR8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NAF1Q96HR8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NAF1Q96HR8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NAF1Q96HR8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NAF1Q96HR8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NAF1Q96HR8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NAF1Q96HR8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NAF1Q96HR8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NAF1Q96HR8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.48■■□□□ 1.51
NAF1Q96HR8 U85056.1-201ENST00000616429 682 ntBASIC24.48■■□□□ 1.51
NAF1Q96HR8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NAF1Q96HR8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.47■■□□□ 1.51
NAF1Q96HR8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
NAF1Q96HR8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
NAF1Q96HR8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.46■■□□□ 1.51
NAF1Q96HR8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.46■■□□□ 1.51
NAF1Q96HR8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.46■■□□□ 1.51
NAF1Q96HR8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NAF1Q96HR8 AC091060.1-201ENST00000623524 1766 ntBASIC24.46■■□□□ 1.51
NAF1Q96HR8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
NAF1Q96HR8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
NAF1Q96HR8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NAF1Q96HR8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NAF1Q96HR8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
NAF1Q96HR8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NAF1Q96HR8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
NAF1Q96HR8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NAF1Q96HR8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NAF1Q96HR8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
NAF1Q96HR8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NAF1Q96HR8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
NAF1Q96HR8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.43■■□□□ 1.5
NAF1Q96HR8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NAF1Q96HR8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NAF1Q96HR8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.42■■□□□ 1.5
NAF1Q96HR8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NAF1Q96HR8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NAF1Q96HR8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.41■■□□□ 1.5
NAF1Q96HR8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.41■■□□□ 1.5
NAF1Q96HR8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.41■■□□□ 1.5
NAF1Q96HR8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
NAF1Q96HR8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NAF1Q96HR8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.4■■□□□ 1.5
NAF1Q96HR8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NAF1Q96HR8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NAF1Q96HR8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
NAF1Q96HR8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.39■■□□□ 1.49
NAF1Q96HR8 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.39■■□□□ 1.49
NAF1Q96HR8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
NAF1Q96HR8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.38■■□□□ 1.49
NAF1Q96HR8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.38■■□□□ 1.49
NAF1Q96HR8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.38■■□□□ 1.49
NAF1Q96HR8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NAF1Q96HR8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NAF1Q96HR8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NAF1Q96HR8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NAF1Q96HR8 AC010864.1-201ENST00000609407 1511 ntBASIC24.37■■□□□ 1.49
NAF1Q96HR8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
NAF1Q96HR8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
NAF1Q96HR8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NAF1Q96HR8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NAF1Q96HR8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.36■■□□□ 1.49
NAF1Q96HR8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
NAF1Q96HR8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.36■■□□□ 1.49
NAF1Q96HR8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
NAF1Q96HR8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NAF1Q96HR8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NAF1Q96HR8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.36■■□□□ 1.49
NAF1Q96HR8 TSPY13P-201ENST00000338964 914 ntBASIC24.36■■□□□ 1.49
NAF1Q96HR8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.36■■□□□ 1.49
NAF1Q96HR8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NAF1Q96HR8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.36■■□□□ 1.49
NAF1Q96HR8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NAF1Q96HR8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.36■■□□□ 1.49
NAF1Q96HR8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NAF1Q96HR8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.35■■□□□ 1.49
NAF1Q96HR8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NAF1Q96HR8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NAF1Q96HR8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NAF1Q96HR8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NAF1Q96HR8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.35■■□□□ 1.49
NAF1Q96HR8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
NAF1Q96HR8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
NAF1Q96HR8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NAF1Q96HR8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
NAF1Q96HR8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NAF1Q96HR8 AC004987.1-201ENST00000428627 508 ntBASIC24.33■■□□□ 1.49
NAF1Q96HR8 RARRES2P1-201ENST00000474487 481 ntBASIC24.33■■□□□ 1.49
NAF1Q96HR8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NAF1Q96HR8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NAF1Q96HR8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
NAF1Q96HR8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NAF1Q96HR8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NAF1Q96HR8 AC060814.1-201ENST00000554326 538 ntBASIC24.32■■□□□ 1.48
NAF1Q96HR8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 1217.6 ms