Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APOBEC3DQ96AK3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
APOBEC3DQ96AK3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.26■□□□□ 0.99
APOBEC3DQ96AK3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.26■□□□□ 0.99
APOBEC3DQ96AK3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APOBEC3DQ96AK3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APOBEC3DQ96AK3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
APOBEC3DQ96AK3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.25■□□□□ 0.99
APOBEC3DQ96AK3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.25■□□□□ 0.99
APOBEC3DQ96AK3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APOBEC3DQ96AK3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APOBEC3DQ96AK3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
APOBEC3DQ96AK3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APOBEC3DQ96AK3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APOBEC3DQ96AK3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.24■□□□□ 0.99
APOBEC3DQ96AK3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.24■□□□□ 0.99
APOBEC3DQ96AK3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.23■□□□□ 0.99
APOBEC3DQ96AK3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APOBEC3DQ96AK3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APOBEC3DQ96AK3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.22■□□□□ 0.99
APOBEC3DQ96AK3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
APOBEC3DQ96AK3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.22■□□□□ 0.99
APOBEC3DQ96AK3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APOBEC3DQ96AK3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.22■□□□□ 0.99
APOBEC3DQ96AK3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 AC060814.1-201ENST00000554326 538 ntBASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 AL359504.2-201ENST00000605506 1601 ntBASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOBEC3DQ96AK3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
APOBEC3DQ96AK3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APOBEC3DQ96AK3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.2■□□□□ 0.98
APOBEC3DQ96AK3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APOBEC3DQ96AK3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
APOBEC3DQ96AK3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOBEC3DQ96AK3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 AC022413.1-201ENST00000624602 984 ntBASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
APOBEC3DQ96AK3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOBEC3DQ96AK3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOBEC3DQ96AK3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
APOBEC3DQ96AK3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
APOBEC3DQ96AK3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
APOBEC3DQ96AK3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.14■□□□□ 0.98
APOBEC3DQ96AK3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
APOBEC3DQ96AK3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APOBEC3DQ96AK3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APOBEC3DQ96AK3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
APOBEC3DQ96AK3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APOBEC3DQ96AK3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.13■□□□□ 0.97
APOBEC3DQ96AK3 AL157400.5-201ENST00000507624 621 ntBASIC21.13■□□□□ 0.97
APOBEC3DQ96AK3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
APOBEC3DQ96AK3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APOBEC3DQ96AK3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOBEC3DQ96AK3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOBEC3DQ96AK3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOBEC3DQ96AK3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.12■□□□□ 0.97
APOBEC3DQ96AK3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOBEC3DQ96AK3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOBEC3DQ96AK3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms