Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.66■□□□□ 0.74
CX3CL1P78423 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.66■□□□□ 0.74
CX3CL1P78423 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CX3CL1P78423 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.65■□□□□ 0.74
CX3CL1P78423 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CX3CL1P78423 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CX3CL1P78423 MIR4449-201ENST00000578365 66 ntBASIC19.64■□□□□ 0.73
CX3CL1P78423 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.64■□□□□ 0.73
CX3CL1P78423 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CX3CL1P78423 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CX3CL1P78423 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CX3CL1P78423 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CX3CL1P78423 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.63■□□□□ 0.73
CX3CL1P78423 AL359258.2-201ENST00000564063 1566 ntBASIC19.63■□□□□ 0.73
CX3CL1P78423 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CX3CL1P78423 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.63■□□□□ 0.73
CX3CL1P78423 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CX3CL1P78423 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CL1P78423 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CX3CL1P78423 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CL1P78423 AC126177.7-201ENST00000547904 679 ntBASIC19.62■□□□□ 0.73
CX3CL1P78423 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CL1P78423 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CL1P78423 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CL1P78423 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CL1P78423 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CL1P78423 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.61■□□□□ 0.73
CX3CL1P78423 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CL1P78423 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CL1P78423 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CL1P78423 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CX3CL1P78423 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CL1P78423 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CL1P78423 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CL1P78423 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CL1P78423 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.59■□□□□ 0.73
CX3CL1P78423 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CL1P78423 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CL1P78423 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.59■□□□□ 0.73
CX3CL1P78423 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.59■□□□□ 0.73
CX3CL1P78423 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CX3CL1P78423 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
CX3CL1P78423 AP004609.3-201ENST00000610705 1884 ntBASIC19.58■□□□□ 0.73
CX3CL1P78423 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.58■□□□□ 0.73
CX3CL1P78423 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.58■□□□□ 0.73
CX3CL1P78423 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CL1P78423 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CL1P78423 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CL1P78423 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CX3CL1P78423 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CL1P78423 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.57■□□□□ 0.72
CX3CL1P78423 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CL1P78423 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.57■□□□□ 0.72
CX3CL1P78423 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CL1P78423 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CL1P78423 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.56■□□□□ 0.72
CX3CL1P78423 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.56■□□□□ 0.72
CX3CL1P78423 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CL1P78423 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CL1P78423 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CX3CL1P78423 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.55■□□□□ 0.72
CX3CL1P78423 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CL1P78423 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CL1P78423 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CL1P78423 AC142472.1-201ENST00000612013 1741 ntBASIC19.54■□□□□ 0.72
CX3CL1P78423 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CL1P78423 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CL1P78423 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.54■□□□□ 0.72
CX3CL1P78423 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CX3CL1P78423 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CX3CL1P78423 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.53■□□□□ 0.72
CX3CL1P78423 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.53■□□□□ 0.72
CX3CL1P78423 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CX3CL1P78423 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.53■□□□□ 0.72
CX3CL1P78423 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CL1P78423 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CL1P78423 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CL1P78423 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CL1P78423 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.52■□□□□ 0.72
CX3CL1P78423 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CL1P78423 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.51■□□□□ 0.71
CX3CL1P78423 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CX3CL1P78423 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CX3CL1P78423 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CL1P78423 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms