Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.14■■■□□ 2.42
PDE1AP54750 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE1AP54750 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.12■■■□□ 2.41
PDE1AP54750 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDE1AP54750 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
PDE1AP54750 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PDE1AP54750 AL359504.2-201ENST00000605506 1601 ntBASIC30.1■■■□□ 2.41
PDE1AP54750 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PDE1AP54750 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PDE1AP54750 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.1■■■□□ 2.41
PDE1AP54750 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PDE1AP54750 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
PDE1AP54750 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PDE1AP54750 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.09■■■□□ 2.41
PDE1AP54750 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.09■■■□□ 2.41
PDE1AP54750 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PDE1AP54750 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PDE1AP54750 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.08■■■□□ 2.41
PDE1AP54750 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDE1AP54750 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.07■■■□□ 2.4
PDE1AP54750 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.07■■■□□ 2.4
PDE1AP54750 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDE1AP54750 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.07■■■□□ 2.4
PDE1AP54750 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDE1AP54750 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDE1AP54750 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDE1AP54750 AC126177.7-201ENST00000547904 679 ntBASIC30.06■■■□□ 2.4
PDE1AP54750 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDE1AP54750 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.06■■■□□ 2.4
PDE1AP54750 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDE1AP54750 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.05■■■□□ 2.4
PDE1AP54750 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.05■■■□□ 2.4
PDE1AP54750 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.05■■■□□ 2.4
PDE1AP54750 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
PDE1AP54750 MIR4449-201ENST00000578365 66 ntBASIC30.04■■■□□ 2.4
PDE1AP54750 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PDE1AP54750 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.04■■■□□ 2.4
PDE1AP54750 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.04■■■□□ 2.4
PDE1AP54750 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PDE1AP54750 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
PDE1AP54750 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PDE1AP54750 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.03■■■□□ 2.4
PDE1AP54750 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PDE1AP54750 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PDE1AP54750 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PDE1AP54750 AC092803.2-201ENST00000564287 1899 ntBASIC30.02■■■□□ 2.4
PDE1AP54750 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PDE1AP54750 AC060814.1-201ENST00000554326 538 ntBASIC30.02■■■□□ 2.4
PDE1AP54750 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
PDE1AP54750 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PDE1AP54750 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.4
PDE1AP54750 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
PDE1AP54750 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
PDE1AP54750 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.01■■■□□ 2.39
PDE1AP54750 AL157400.5-201ENST00000507624 621 ntBASIC30■■■□□ 2.39
PDE1AP54750 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PDE1AP54750 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30■■■□□ 2.39
PDE1AP54750 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.99■■■□□ 2.39
PDE1AP54750 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.99■■■□□ 2.39
PDE1AP54750 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
PDE1AP54750 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDE1AP54750 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PDE1AP54750 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.98■■■□□ 2.39
PDE1AP54750 AC145676.1-201ENST00000514988 2004 ntBASIC29.98■■■□□ 2.39
PDE1AP54750 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PDE1AP54750 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
PDE1AP54750 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PDE1AP54750 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PDE1AP54750 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.97■■■□□ 2.39
PDE1AP54750 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PDE1AP54750 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PDE1AP54750 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PDE1AP54750 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDE1AP54750 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.96■■■□□ 2.39
PDE1AP54750 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDE1AP54750 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDE1AP54750 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
PDE1AP54750 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
PDE1AP54750 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.94■■■□□ 2.38
PDE1AP54750 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PDE1AP54750 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
PDE1AP54750 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms