Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF728P0DKX0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF728P0DKX0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF728P0DKX0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ZNF728P0DKX0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 AC092803.2-201ENST00000564287 1899 ntBASIC20.69■□□□□ 0.9
ZNF728P0DKX0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 DUSP8P4-201ENST00000399538 1761 ntBASIC20.67■□□□□ 0.9
ZNF728P0DKX0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 MIR639-201ENST00000384974 98 ntBASIC20.66■□□□□ 0.9
ZNF728P0DKX0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 HLA-V-202ENST00000446817 847 ntBASIC20.65■□□□□ 0.9
ZNF728P0DKX0 AC148477.6-201ENST00000623746 465 ntBASIC20.65■□□□□ 0.9
ZNF728P0DKX0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF728P0DKX0 AP004609.3-201ENST00000610705 1884 ntBASIC20.64■□□□□ 0.9
ZNF728P0DKX0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ZNF728P0DKX0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 MIR219A2-201ENST00000608502 1504 ntBASIC20.61■□□□□ 0.89
ZNF728P0DKX0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF728P0DKX0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms