Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC1P07992 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC1P07992 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.59■■□□□ 1.05
ERCC1P07992 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC1P07992 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ERCC1P07992 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC1P07992 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC1P07992 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.58■■□□□ 1.05
ERCC1P07992 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.58■■□□□ 1.05
ERCC1P07992 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ERCC1P07992 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC1P07992 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC1P07992 GPX1-201ENST00000419349 1106 ntBASIC21.57■■□□□ 1.04
ERCC1P07992 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.57■■□□□ 1.04
ERCC1P07992 AC148477.6-201ENST00000623746 465 ntBASIC21.57■■□□□ 1.04
ERCC1P07992 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.57■■□□□ 1.04
ERCC1P07992 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC1P07992 AL449106.1-201ENST00000608517 1980 ntBASIC21.57■■□□□ 1.04
ERCC1P07992 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.57■■□□□ 1.04
ERCC1P07992 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC1P07992 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.57■■□□□ 1.04
ERCC1P07992 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ERCC1P07992 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC1P07992 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC1P07992 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.56■■□□□ 1.04
ERCC1P07992 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.56■■□□□ 1.04
ERCC1P07992 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC1P07992 AC091060.1-201ENST00000623524 1766 ntBASIC21.56■■□□□ 1.04
ERCC1P07992 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC1P07992 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC1P07992 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ERCC1P07992 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ERCC1P07992 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ERCC1P07992 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.55■■□□□ 1.04
ERCC1P07992 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC1P07992 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ERCC1P07992 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC1P07992 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC1P07992 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC1P07992 AC022413.1-201ENST00000624602 984 ntBASIC21.54■■□□□ 1.04
ERCC1P07992 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.53■■□□□ 1.04
ERCC1P07992 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC1P07992 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC1P07992 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC1P07992 AC126177.7-201ENST00000547904 679 ntBASIC21.53■■□□□ 1.04
ERCC1P07992 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC1P07992 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC1P07992 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC1P07992 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ERCC1P07992 AC145676.1-201ENST00000514988 2004 ntBASIC21.53■■□□□ 1.04
ERCC1P07992 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ERCC1P07992 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.52■■□□□ 1.04
ERCC1P07992 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
ERCC1P07992 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC1P07992 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC1P07992 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ERCC1P07992 RNF126P1-201ENST00000567452 1320 ntBASIC21.51■■□□□ 1.03
ERCC1P07992 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC1P07992 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC1P07992 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC1P07992 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.49■■□□□ 1.03
ERCC1P07992 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC1P07992 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC1P07992 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC1P07992 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
ERCC1P07992 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC1P07992 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ERCC1P07992 RARRES2P2-201ENST00000394842 485 ntBASIC21.48■■□□□ 1.03
ERCC1P07992 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC1P07992 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ERCC1P07992 MIR219A2-201ENST00000608502 1504 ntBASIC21.47■■□□□ 1.03
ERCC1P07992 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC1P07992 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC1P07992 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC1P07992 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC1P07992 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC1P07992 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.46■■□□□ 1.03
ERCC1P07992 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC1P07992 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.45■■□□□ 1.02
ERCC1P07992 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
ERCC1P07992 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC1P07992 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ERCC1P07992 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.45■■□□□ 1.02
ERCC1P07992 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC1P07992 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC1P07992 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC1P07992 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ERCC1P07992 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ERCC1P07992 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC1P07992 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ERCC1P07992 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.44■■□□□ 1.02
ERCC1P07992 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC1P07992 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms