Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.45■■□□□ 1.5
NDUFS3O75489 AC126177.7-201ENST00000547904 679 ntBASIC24.45■■□□□ 1.5
NDUFS3O75489 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NDUFS3O75489 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
NDUFS3O75489 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.44■■□□□ 1.5
NDUFS3O75489 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NDUFS3O75489 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.44■■□□□ 1.5
NDUFS3O75489 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.44■■□□□ 1.5
NDUFS3O75489 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NDUFS3O75489 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
NDUFS3O75489 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
NDUFS3O75489 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.42■■□□□ 1.5
NDUFS3O75489 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NDUFS3O75489 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NDUFS3O75489 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NDUFS3O75489 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
NDUFS3O75489 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NDUFS3O75489 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NDUFS3O75489 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
NDUFS3O75489 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NDUFS3O75489 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NDUFS3O75489 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.41■■□□□ 1.5
NDUFS3O75489 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NDUFS3O75489 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.41■■□□□ 1.5
NDUFS3O75489 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NDUFS3O75489 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NDUFS3O75489 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
NDUFS3O75489 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NDUFS3O75489 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.38■■□□□ 1.49
NDUFS3O75489 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NDUFS3O75489 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NDUFS3O75489 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
NDUFS3O75489 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NDUFS3O75489 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
NDUFS3O75489 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NDUFS3O75489 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NDUFS3O75489 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.36■■□□□ 1.49
NDUFS3O75489 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NDUFS3O75489 AC091060.1-201ENST00000623524 1766 ntBASIC24.35■■□□□ 1.49
NDUFS3O75489 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NDUFS3O75489 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.35■■□□□ 1.49
NDUFS3O75489 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
NDUFS3O75489 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NDUFS3O75489 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NDUFS3O75489 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NDUFS3O75489 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NDUFS3O75489 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NDUFS3O75489 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
NDUFS3O75489 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.34■■□□□ 1.49
NDUFS3O75489 AL359504.2-201ENST00000605506 1601 ntBASIC24.33■■□□□ 1.49
NDUFS3O75489 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.33■■□□□ 1.49
NDUFS3O75489 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.33■■□□□ 1.49
NDUFS3O75489 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.33■■□□□ 1.49
NDUFS3O75489 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.32■■□□□ 1.48
NDUFS3O75489 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
NDUFS3O75489 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.32■■□□□ 1.48
NDUFS3O75489 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NDUFS3O75489 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.32■■□□□ 1.48
NDUFS3O75489 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NDUFS3O75489 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NDUFS3O75489 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.31■■□□□ 1.48
NDUFS3O75489 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NDUFS3O75489 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.31■■□□□ 1.48
NDUFS3O75489 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDUFS3O75489 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NDUFS3O75489 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDUFS3O75489 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDUFS3O75489 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDUFS3O75489 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NDUFS3O75489 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NDUFS3O75489 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NDUFS3O75489 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NDUFS3O75489 AC092803.2-201ENST00000564287 1899 ntBASIC24.29■■□□□ 1.48
NDUFS3O75489 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NDUFS3O75489 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NDUFS3O75489 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDUFS3O75489 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDUFS3O75489 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDUFS3O75489 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDUFS3O75489 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NDUFS3O75489 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
NDUFS3O75489 AC145676.1-201ENST00000514988 2004 ntBASIC24.27■■□□□ 1.48
NDUFS3O75489 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDUFS3O75489 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDUFS3O75489 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NDUFS3O75489 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NDUFS3O75489 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDUFS3O75489 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.26■■□□□ 1.47
NDUFS3O75489 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.26■■□□□ 1.47
NDUFS3O75489 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDUFS3O75489 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms