Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC026202.3-201ENST00000600805 1127 ntBASIC26.4■■□□□ 1.82
SPTLC1O15269 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPTLC1O15269 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPTLC1O15269 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SPTLC1O15269 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
SPTLC1O15269 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SPTLC1O15269 RP9P-202ENST00000450133 1212 ntBASIC26.39■■□□□ 1.82
SPTLC1O15269 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SPTLC1O15269 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.38■■□□□ 1.81
SPTLC1O15269 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPTLC1O15269 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SPTLC1O15269 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.38■■□□□ 1.81
SPTLC1O15269 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SPTLC1O15269 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPTLC1O15269 AC093536.1-201ENST00000569153 554 ntBASIC26.37■■□□□ 1.81
SPTLC1O15269 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPTLC1O15269 AC133552.2-201ENST00000619106 1032 ntBASIC26.37■■□□□ 1.81
SPTLC1O15269 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
SPTLC1O15269 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SPTLC1O15269 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.36■■□□□ 1.81
SPTLC1O15269 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SPTLC1O15269 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SPTLC1O15269 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.36■■□□□ 1.81
SPTLC1O15269 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPTLC1O15269 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPTLC1O15269 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPTLC1O15269 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.35■■□□□ 1.81
SPTLC1O15269 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.34■■□□□ 1.81
SPTLC1O15269 AL592293.1-201ENST00000502889 1188 ntBASIC26.34■■□□□ 1.81
SPTLC1O15269 MIR3960-201ENST00000583311 91 ntBASIC26.34■■□□□ 1.81
SPTLC1O15269 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 RAP2CP1-202ENST00000605179 643 ntBASIC26.33■■□□□ 1.81
SPTLC1O15269 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.33■■□□□ 1.81
SPTLC1O15269 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC1O15269 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SPTLC1O15269 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.32■■□□□ 1.8
SPTLC1O15269 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC1O15269 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
SPTLC1O15269 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.31■■□□□ 1.8
SPTLC1O15269 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC1O15269 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC1O15269 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SPTLC1O15269 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.3■■□□□ 1.8
SPTLC1O15269 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC1O15269 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPTLC1O15269 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SPTLC1O15269 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SPTLC1O15269 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.29■■□□□ 1.8
SPTLC1O15269 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SPTLC1O15269 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SPTLC1O15269 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.28■■□□□ 1.8
SPTLC1O15269 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.28■■□□□ 1.8
SPTLC1O15269 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
SPTLC1O15269 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SPTLC1O15269 AC004987.1-201ENST00000428627 508 ntBASIC26.27■■□□□ 1.8
SPTLC1O15269 AL033527.3-201ENST00000566366 1196 ntBASIC26.27■■□□□ 1.8
SPTLC1O15269 AC129492.7-201ENST00000622992 756 ntBASIC26.27■■□□□ 1.8
SPTLC1O15269 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPTLC1O15269 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC1O15269 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC1O15269 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SPTLC1O15269 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.26■■□□□ 1.79
SPTLC1O15269 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC1O15269 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC1O15269 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC1O15269 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC1O15269 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC1O15269 ATP5G2P3-201ENST00000429083 425 ntBASIC26.24■■□□□ 1.79
SPTLC1O15269 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.24■■□□□ 1.79
SPTLC1O15269 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC1O15269 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SPTLC1O15269 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPTLC1O15269 AC142472.1-201ENST00000612013 1741 ntBASIC26.22■■□□□ 1.79
SPTLC1O15269 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SPTLC1O15269 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.22■■□□□ 1.79
SPTLC1O15269 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPTLC1O15269 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.22■■□□□ 1.79
SPTLC1O15269 AP004609.3-201ENST00000610705 1884 ntBASIC26.21■■□□□ 1.79
SPTLC1O15269 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPTLC1O15269 SPCS2P3-201ENST00000500401 656 ntBASIC26.21■■□□□ 1.79
SPTLC1O15269 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
SPTLC1O15269 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.21■■□□□ 1.79
SPTLC1O15269 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPTLC1O15269 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPTLC1O15269 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms