Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 AC110285.7-201ENST00000624417 1536 ntBASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV8-4A0A0B4J246 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV8-4A0A0B4J246 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-4A0A0B4J246 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 LINC01971-201ENST00000617888 1048 ntBASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-4A0A0B4J246 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV8-4A0A0B4J246 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 AC093323.1-202ENST00000635031 2045 ntBASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-4A0A0B4J246 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-4A0A0B4J246 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV8-4A0A0B4J246 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-4A0A0B4J246 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-4A0A0B4J246 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV8-4A0A0B4J246 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-4A0A0B4J246 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRAV8-4A0A0B4J246 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-4A0A0B4J246 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-4A0A0B4J246 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-4A0A0B4J246 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV8-4A0A0B4J246 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-4A0A0B4J246 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-4A0A0B4J246 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-4A0A0B4J246 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms