Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.56■■■□□ 2.16
PTCH2Q9Y6C5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.55■■■□□ 2.16
PTCH2Q9Y6C5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.54■■■□□ 2.16
PTCH2Q9Y6C5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.54■■■□□ 2.16
PTCH2Q9Y6C5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
PTCH2Q9Y6C5 AC018755.3-202ENST00000596210 929 ntBASIC28.54■■■□□ 2.16
PTCH2Q9Y6C5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.53■■■□□ 2.16
PTCH2Q9Y6C5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PTCH2Q9Y6C5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PTCH2Q9Y6C5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.52■■■□□ 2.16
PTCH2Q9Y6C5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
PTCH2Q9Y6C5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
PTCH2Q9Y6C5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PTCH2Q9Y6C5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.51■■■□□ 2.16
PTCH2Q9Y6C5 AC008406.3-201ENST00000620001 1374 ntBASIC28.51■■■□□ 2.16
PTCH2Q9Y6C5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.51■■■□□ 2.15
PTCH2Q9Y6C5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PTCH2Q9Y6C5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PTCH2Q9Y6C5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.5■■■□□ 2.15
PTCH2Q9Y6C5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.5■■■□□ 2.15
PTCH2Q9Y6C5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PTCH2Q9Y6C5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PTCH2Q9Y6C5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PTCH2Q9Y6C5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PTCH2Q9Y6C5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PTCH2Q9Y6C5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PTCH2Q9Y6C5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
PTCH2Q9Y6C5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
PTCH2Q9Y6C5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PTCH2Q9Y6C5 AC239859.2-201ENST00000444165 318 ntBASIC28.47■■■□□ 2.15
PTCH2Q9Y6C5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
PTCH2Q9Y6C5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PTCH2Q9Y6C5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PTCH2Q9Y6C5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PTCH2Q9Y6C5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PTCH2Q9Y6C5 MIR3960-201ENST00000583311 91 ntBASIC28.46■■■□□ 2.15
PTCH2Q9Y6C5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PTCH2Q9Y6C5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PTCH2Q9Y6C5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.45■■■□□ 2.15
PTCH2Q9Y6C5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
PTCH2Q9Y6C5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.45■■■□□ 2.14
PTCH2Q9Y6C5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.45■■■□□ 2.14
PTCH2Q9Y6C5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
PTCH2Q9Y6C5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.14
PTCH2Q9Y6C5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PTCH2Q9Y6C5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PTCH2Q9Y6C5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.44■■■□□ 2.14
PTCH2Q9Y6C5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.44■■■□□ 2.14
PTCH2Q9Y6C5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
PTCH2Q9Y6C5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.43■■■□□ 2.14
PTCH2Q9Y6C5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.43■■■□□ 2.14
PTCH2Q9Y6C5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PTCH2Q9Y6C5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PTCH2Q9Y6C5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.42■■■□□ 2.14
PTCH2Q9Y6C5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
PTCH2Q9Y6C5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PTCH2Q9Y6C5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PTCH2Q9Y6C5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PTCH2Q9Y6C5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PTCH2Q9Y6C5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.39■■■□□ 2.14
PTCH2Q9Y6C5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PTCH2Q9Y6C5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PTCH2Q9Y6C5 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.38■■■□□ 2.13
PTCH2Q9Y6C5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.37■■■□□ 2.13
PTCH2Q9Y6C5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.37■■■□□ 2.13
PTCH2Q9Y6C5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
PTCH2Q9Y6C5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.37■■■□□ 2.13
PTCH2Q9Y6C5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PTCH2Q9Y6C5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.36■■■□□ 2.13
PTCH2Q9Y6C5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.36■■■□□ 2.13
PTCH2Q9Y6C5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.35■■■□□ 2.13
PTCH2Q9Y6C5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
PTCH2Q9Y6C5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PTCH2Q9Y6C5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTCH2Q9Y6C5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTCH2Q9Y6C5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTCH2Q9Y6C5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.34■■■□□ 2.13
PTCH2Q9Y6C5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PTCH2Q9Y6C5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
PTCH2Q9Y6C5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PTCH2Q9Y6C5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PTCH2Q9Y6C5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
PTCH2Q9Y6C5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTCH2Q9Y6C5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTCH2Q9Y6C5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PTCH2Q9Y6C5 MIR638-201ENST00000385237 100 ntBASIC28.31■■■□□ 2.12
PTCH2Q9Y6C5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.31■■■□□ 2.12
PTCH2Q9Y6C5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PTCH2Q9Y6C5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PTCH2Q9Y6C5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.3■■■□□ 2.12
PTCH2Q9Y6C5 Z92544.1-202ENST00000571933 1220 ntBASIC28.3■■■□□ 2.12
PTCH2Q9Y6C5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PTCH2Q9Y6C5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.29■■■□□ 2.12
PTCH2Q9Y6C5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms