Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HES4Q9HCC6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HES4Q9HCC6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HES4Q9HCC6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HES4Q9HCC6 AC016575.1-201ENST00000607026 382 ntBASIC20.89■□□□□ 0.93
HES4Q9HCC6 MIR7108-201ENST00000614319 87 ntBASIC20.89■□□□□ 0.93
HES4Q9HCC6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.89■□□□□ 0.93
HES4Q9HCC6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HES4Q9HCC6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HES4Q9HCC6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HES4Q9HCC6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HES4Q9HCC6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HES4Q9HCC6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HES4Q9HCC6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.87■□□□□ 0.93
HES4Q9HCC6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HES4Q9HCC6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.87■□□□□ 0.93
HES4Q9HCC6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HES4Q9HCC6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.86■□□□□ 0.93
HES4Q9HCC6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HES4Q9HCC6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.86■□□□□ 0.93
HES4Q9HCC6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HES4Q9HCC6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HES4Q9HCC6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HES4Q9HCC6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HES4Q9HCC6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HES4Q9HCC6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.85■□□□□ 0.93
HES4Q9HCC6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
HES4Q9HCC6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HES4Q9HCC6 AP004609.3-201ENST00000610705 1884 ntBASIC20.85■□□□□ 0.93
HES4Q9HCC6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HES4Q9HCC6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HES4Q9HCC6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HES4Q9HCC6 AC142472.1-201ENST00000612013 1741 ntBASIC20.84■□□□□ 0.93
HES4Q9HCC6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HES4Q9HCC6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HES4Q9HCC6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HES4Q9HCC6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HES4Q9HCC6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HES4Q9HCC6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.84■□□□□ 0.93
HES4Q9HCC6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HES4Q9HCC6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.83■□□□□ 0.93
HES4Q9HCC6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HES4Q9HCC6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HES4Q9HCC6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HES4Q9HCC6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HES4Q9HCC6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HES4Q9HCC6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HES4Q9HCC6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HES4Q9HCC6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HES4Q9HCC6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HES4Q9HCC6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.81■□□□□ 0.92
HES4Q9HCC6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HES4Q9HCC6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HES4Q9HCC6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.79■□□□□ 0.92
HES4Q9HCC6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HES4Q9HCC6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HES4Q9HCC6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HES4Q9HCC6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.79■□□□□ 0.92
HES4Q9HCC6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HES4Q9HCC6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.79■□□□□ 0.92
HES4Q9HCC6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.79■□□□□ 0.92
HES4Q9HCC6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HES4Q9HCC6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HES4Q9HCC6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HES4Q9HCC6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.78■□□□□ 0.92
HES4Q9HCC6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HES4Q9HCC6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HES4Q9HCC6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HES4Q9HCC6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HES4Q9HCC6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.77■□□□□ 0.92
HES4Q9HCC6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HES4Q9HCC6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.77■□□□□ 0.92
HES4Q9HCC6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
HES4Q9HCC6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
HES4Q9HCC6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.77■□□□□ 0.91
HES4Q9HCC6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HES4Q9HCC6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HES4Q9HCC6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HES4Q9HCC6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.76■□□□□ 0.91
HES4Q9HCC6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HES4Q9HCC6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HES4Q9HCC6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HES4Q9HCC6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.76■□□□□ 0.91
HES4Q9HCC6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.75■□□□□ 0.91
HES4Q9HCC6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HES4Q9HCC6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
HES4Q9HCC6 MIR639-201ENST00000384974 98 ntBASIC20.75■□□□□ 0.91
HES4Q9HCC6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.75■□□□□ 0.91
HES4Q9HCC6 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.75■□□□□ 0.91
HES4Q9HCC6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HES4Q9HCC6 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.75■□□□□ 0.91
HES4Q9HCC6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HES4Q9HCC6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.74■□□□□ 0.91
HES4Q9HCC6 AL359258.2-201ENST00000564063 1566 ntBASIC20.74■□□□□ 0.91
HES4Q9HCC6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.74■□□□□ 0.91
HES4Q9HCC6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HES4Q9HCC6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HES4Q9HCC6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HES4Q9HCC6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HES4Q9HCC6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms