Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CYSTM1Q9H1C7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CYSTM1Q9H1C7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC14.71□□□□□ -0.05
CYSTM1Q9H1C7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CYSTM1Q9H1C7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CYSTM1Q9H1C7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CYSTM1Q9H1C7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CYSTM1Q9H1C7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CYSTM1Q9H1C7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CYSTM1Q9H1C7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CYSTM1Q9H1C7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CYSTM1Q9H1C7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CYSTM1Q9H1C7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CYSTM1Q9H1C7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 C1orf229-201ENST00000623686 2258 ntBASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CYSTM1Q9H1C7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC14.68□□□□□ -0.06
CYSTM1Q9H1C7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CYSTM1Q9H1C7 AL391422.3-201ENST00000603791 2761 ntBASIC14.68□□□□□ -0.06
CYSTM1Q9H1C7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC14.68□□□□□ -0.06
CYSTM1Q9H1C7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC14.67□□□□□ -0.06
CYSTM1Q9H1C7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CYSTM1Q9H1C7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CYSTM1Q9H1C7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CYSTM1Q9H1C7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CYSTM1Q9H1C7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.07
CYSTM1Q9H1C7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 LINC00565-201ENST00000562710 2331 ntBASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CYSTM1Q9H1C7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CYSTM1Q9H1C7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CYSTM1Q9H1C7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CYSTM1Q9H1C7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CYSTM1Q9H1C7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CYSTM1Q9H1C7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CYSTM1Q9H1C7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms