Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIMC1Q8NDZ2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SIMC1Q8NDZ2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SIMC1Q8NDZ2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIMC1Q8NDZ2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIMC1Q8NDZ2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SIMC1Q8NDZ2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.23■■□□□ 1.31
SIMC1Q8NDZ2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIMC1Q8NDZ2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.23■■□□□ 1.31
SIMC1Q8NDZ2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIMC1Q8NDZ2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SIMC1Q8NDZ2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIMC1Q8NDZ2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIMC1Q8NDZ2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIMC1Q8NDZ2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIMC1Q8NDZ2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.2■■□□□ 1.3
SIMC1Q8NDZ2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
SIMC1Q8NDZ2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIMC1Q8NDZ2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIMC1Q8NDZ2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 WHAMMP3-201ENST00000611636 1609 ntBASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIMC1Q8NDZ2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SIMC1Q8NDZ2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SIMC1Q8NDZ2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SIMC1Q8NDZ2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SIMC1Q8NDZ2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.18■■□□□ 1.3
SIMC1Q8NDZ2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SIMC1Q8NDZ2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.16■■□□□ 1.3
SIMC1Q8NDZ2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SIMC1Q8NDZ2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIMC1Q8NDZ2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.16■■□□□ 1.3
SIMC1Q8NDZ2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.16■■□□□ 1.3
SIMC1Q8NDZ2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.16■■□□□ 1.3
SIMC1Q8NDZ2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SIMC1Q8NDZ2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SIMC1Q8NDZ2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIMC1Q8NDZ2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SIMC1Q8NDZ2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SIMC1Q8NDZ2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIMC1Q8NDZ2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIMC1Q8NDZ2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SIMC1Q8NDZ2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIMC1Q8NDZ2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIMC1Q8NDZ2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.13■■□□□ 1.29
SIMC1Q8NDZ2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIMC1Q8NDZ2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIMC1Q8NDZ2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SIMC1Q8NDZ2 MIR4449-201ENST00000578365 66 ntBASIC23.12■■□□□ 1.29
SIMC1Q8NDZ2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIMC1Q8NDZ2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIMC1Q8NDZ2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIMC1Q8NDZ2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.11■■□□□ 1.29
SIMC1Q8NDZ2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIMC1Q8NDZ2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 AL359258.2-201ENST00000564063 1566 ntBASIC23.1■■□□□ 1.29
SIMC1Q8NDZ2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.09■■□□□ 1.29
SIMC1Q8NDZ2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIMC1Q8NDZ2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms