Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 AC136428.2-201ENST00000563187 214 ntBASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC71LQ8N9Z2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC71LQ8N9Z2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC71LQ8N9Z2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC71LQ8N9Z2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC71LQ8N9Z2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC71LQ8N9Z2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC71LQ8N9Z2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC71LQ8N9Z2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC71LQ8N9Z2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71LQ8N9Z2 AC142472.1-201ENST00000612013 1741 ntBASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC71LQ8N9Z2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC71LQ8N9Z2 AC005559.1-201ENST00000589661 871 ntBASIC20.4■□□□□ 0.86
CCDC71LQ8N9Z2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC71LQ8N9Z2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC71LQ8N9Z2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC71LQ8N9Z2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71LQ8N9Z2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC71LQ8N9Z2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC71LQ8N9Z2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC71LQ8N9Z2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC71LQ8N9Z2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC71LQ8N9Z2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC71LQ8N9Z2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC71LQ8N9Z2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC71LQ8N9Z2 AC093323.1-202ENST00000635031 2045 ntBASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC71LQ8N9Z2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71LQ8N9Z2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC71LQ8N9Z2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71LQ8N9Z2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
CCDC71LQ8N9Z2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71LQ8N9Z2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC71LQ8N9Z2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC71LQ8N9Z2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC71LQ8N9Z2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71LQ8N9Z2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC71LQ8N9Z2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC71LQ8N9Z2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71LQ8N9Z2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71LQ8N9Z2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71LQ8N9Z2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71LQ8N9Z2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC71LQ8N9Z2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71LQ8N9Z2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC71LQ8N9Z2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71LQ8N9Z2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71LQ8N9Z2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71LQ8N9Z2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC71LQ8N9Z2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71LQ8N9Z2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71LQ8N9Z2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC71LQ8N9Z2 MIR6090-201ENST00000622481 60 ntBASIC20.31■□□□□ 0.84
CCDC71LQ8N9Z2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71LQ8N9Z2 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms