Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.55■■□□□ 1.36
ARHGEF39Q8N4T4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ARHGEF39Q8N4T4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.54■■□□□ 1.36
ARHGEF39Q8N4T4 ECEL1P2-201ENST00000461596 1295 ntBASIC23.54■■□□□ 1.36
ARHGEF39Q8N4T4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ARHGEF39Q8N4T4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ARHGEF39Q8N4T4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF39Q8N4T4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF39Q8N4T4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
ARHGEF39Q8N4T4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ARHGEF39Q8N4T4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
ARHGEF39Q8N4T4 AL449106.1-201ENST00000608517 1980 ntBASIC23.52■■□□□ 1.36
ARHGEF39Q8N4T4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.52■■□□□ 1.36
ARHGEF39Q8N4T4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.51■■□□□ 1.35
ARHGEF39Q8N4T4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF39Q8N4T4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.5■■□□□ 1.35
ARHGEF39Q8N4T4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ARHGEF39Q8N4T4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ARHGEF39Q8N4T4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ARHGEF39Q8N4T4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.49■■□□□ 1.35
ARHGEF39Q8N4T4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ARHGEF39Q8N4T4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 AC025884.2-201ENST00000553429 711 ntBASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ARHGEF39Q8N4T4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ARHGEF39Q8N4T4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.47■■□□□ 1.35
ARHGEF39Q8N4T4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ARHGEF39Q8N4T4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
ARHGEF39Q8N4T4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.47■■□□□ 1.35
ARHGEF39Q8N4T4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
ARHGEF39Q8N4T4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ARHGEF39Q8N4T4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.46■■□□□ 1.35
ARHGEF39Q8N4T4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
ARHGEF39Q8N4T4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
ARHGEF39Q8N4T4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.45■■□□□ 1.34
ARHGEF39Q8N4T4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.45■■□□□ 1.34
ARHGEF39Q8N4T4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ARHGEF39Q8N4T4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ARHGEF39Q8N4T4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ARHGEF39Q8N4T4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ARHGEF39Q8N4T4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.43■■□□□ 1.34
ARHGEF39Q8N4T4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.43■■□□□ 1.34
ARHGEF39Q8N4T4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.43■■□□□ 1.34
ARHGEF39Q8N4T4 AL359504.2-201ENST00000605506 1601 ntBASIC23.43■■□□□ 1.34
ARHGEF39Q8N4T4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
ARHGEF39Q8N4T4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ARHGEF39Q8N4T4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
ARHGEF39Q8N4T4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.42■■□□□ 1.34
ARHGEF39Q8N4T4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ARHGEF39Q8N4T4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ARHGEF39Q8N4T4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ARHGEF39Q8N4T4 SMPD5-203ENST00000639008 1464 ntBASIC23.41■■□□□ 1.34
ARHGEF39Q8N4T4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.4■■□□□ 1.34
ARHGEF39Q8N4T4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
ARHGEF39Q8N4T4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
ARHGEF39Q8N4T4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ARHGEF39Q8N4T4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ARHGEF39Q8N4T4 ABHD17AP5-201ENST00000580133 923 ntBASIC23.39■■□□□ 1.33
ARHGEF39Q8N4T4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ARHGEF39Q8N4T4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ARHGEF39Q8N4T4 AC007029.1-201ENST00000604183 313 ntBASIC23.38■■□□□ 1.33
ARHGEF39Q8N4T4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARHGEF39Q8N4T4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARHGEF39Q8N4T4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.37■■□□□ 1.33
ARHGEF39Q8N4T4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ARHGEF39Q8N4T4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARHGEF39Q8N4T4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ARHGEF39Q8N4T4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.35■■□□□ 1.33
ARHGEF39Q8N4T4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.35■■□□□ 1.33
ARHGEF39Q8N4T4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ARHGEF39Q8N4T4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARHGEF39Q8N4T4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.34■■□□□ 1.33
ARHGEF39Q8N4T4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
ARHGEF39Q8N4T4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ARHGEF39Q8N4T4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ARHGEF39Q8N4T4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ARHGEF39Q8N4T4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
ARHGEF39Q8N4T4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ARHGEF39Q8N4T4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ARHGEF39Q8N4T4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.32■■□□□ 1.32
ARHGEF39Q8N4T4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms