Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.05■□□□□ 0.64
TM4SF20Q53R12 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF20Q53R12 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF20Q53R12 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TM4SF20Q53R12 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF20Q53R12 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TM4SF20Q53R12 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TM4SF20Q53R12 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF20Q53R12 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TM4SF20Q53R12 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF20Q53R12 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 MIR4449-201ENST00000578365 66 ntBASIC18.99■□□□□ 0.63
TM4SF20Q53R12 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 WHAMMP3-201ENST00000611636 1609 ntBASIC18.98■□□□□ 0.63
TM4SF20Q53R12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 AL449106.1-201ENST00000608517 1980 ntBASIC18.96■□□□□ 0.63
TM4SF20Q53R12 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 AL121749.1-202ENST00000609313 2153 ntBASIC18.96■□□□□ 0.63
TM4SF20Q53R12 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms