Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.39■■□□□ 1.02
CHRFAM7AQ494W8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.39■■□□□ 1.02
CHRFAM7AQ494W8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.39■■□□□ 1.02
CHRFAM7AQ494W8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 AC022413.1-201ENST00000624602 984 ntBASIC21.38■■□□□ 1.01
CHRFAM7AQ494W8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CHRFAM7AQ494W8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.38■■□□□ 1.01
CHRFAM7AQ494W8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 AC100797.4-201ENST00000631653 1827 ntBASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRFAM7AQ494W8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRFAM7AQ494W8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRFAM7AQ494W8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHRFAM7AQ494W8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CHRFAM7AQ494W8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CHRFAM7AQ494W8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CHRFAM7AQ494W8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRFAM7AQ494W8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 AC135731.1-201ENST00000569415 2548 ntBASIC21.3■■□□□ 1
CHRFAM7AQ494W8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 AL449106.1-201ENST00000608517 1980 ntBASIC21.28■■□□□ 1
CHRFAM7AQ494W8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 AP002414.2-202ENST00000590929 1450 ntBASIC21.27■■□□□ 1
CHRFAM7AQ494W8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 AC018358.1-201ENST00000631079 1402 ntBASIC21.27■■□□□ 1
CHRFAM7AQ494W8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 AL033527.3-201ENST00000566366 1196 ntBASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms