Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFNB2P52799 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.31■■□□□ 1
EFNB2P52799 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.31■■□□□ 1
EFNB2P52799 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
EFNB2P52799 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFNB2P52799 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFNB2P52799 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.29■■□□□ 1
EFNB2P52799 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFNB2P52799 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
EFNB2P52799 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFNB2P52799 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.28■■□□□ 1
EFNB2P52799 LINC00273-201ENST00000539813 1452 ntBASIC21.28■■□□□ 1
EFNB2P52799 AC093323.1-202ENST00000635031 2045 ntBASIC21.28■■□□□ 1
EFNB2P52799 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFNB2P52799 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.28■■□□□ 1
EFNB2P52799 MIR7108-201ENST00000614319 87 ntBASIC21.28■■□□□ 1
EFNB2P52799 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFNB2P52799 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.27■■□□□ 1
EFNB2P52799 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
EFNB2P52799 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EFNB2P52799 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EFNB2P52799 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFNB2P52799 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFNB2P52799 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFNB2P52799 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.26■□□□□ 0.99
EFNB2P52799 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.26■□□□□ 0.99
EFNB2P52799 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
EFNB2P52799 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB2P52799 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB2P52799 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.25■□□□□ 0.99
EFNB2P52799 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB2P52799 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.25■□□□□ 0.99
EFNB2P52799 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB2P52799 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.25■□□□□ 0.99
EFNB2P52799 MIR6090-201ENST00000622481 60 ntBASIC21.25■□□□□ 0.99
EFNB2P52799 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.25■□□□□ 0.99
EFNB2P52799 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EFNB2P52799 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB2P52799 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.24■□□□□ 0.99
EFNB2P52799 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB2P52799 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
EFNB2P52799 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
EFNB2P52799 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB2P52799 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB2P52799 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB2P52799 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.24■□□□□ 0.99
EFNB2P52799 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB2P52799 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFNB2P52799 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.23■□□□□ 0.99
EFNB2P52799 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFNB2P52799 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFNB2P52799 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB2P52799 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB2P52799 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB2P52799 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.21■□□□□ 0.99
EFNB2P52799 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.21■□□□□ 0.99
EFNB2P52799 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.21■□□□□ 0.99
EFNB2P52799 AC108673.1-201ENST00000510422 1159 ntBASIC21.21■□□□□ 0.99
EFNB2P52799 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB2P52799 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
EFNB2P52799 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB2P52799 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB2P52799 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFNB2P52799 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFNB2P52799 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EFNB2P52799 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EFNB2P52799 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFNB2P52799 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFNB2P52799 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.19■□□□□ 0.98
EFNB2P52799 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFNB2P52799 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
EFNB2P52799 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB2P52799 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB2P52799 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB2P52799 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB2P52799 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB2P52799 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.17■□□□□ 0.98
EFNB2P52799 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB2P52799 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB2P52799 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.17■□□□□ 0.98
EFNB2P52799 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFNB2P52799 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.16■□□□□ 0.98
EFNB2P52799 AC142472.1-201ENST00000612013 1741 ntBASIC21.15■□□□□ 0.98
EFNB2P52799 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
EFNB2P52799 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB2P52799 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB2P52799 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.15■□□□□ 0.98
EFNB2P52799 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.15■□□□□ 0.98
EFNB2P52799 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.15■□□□□ 0.98
EFNB2P52799 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB2P52799 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EFNB2P52799 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EFNB2P52799 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.13■□□□□ 0.97
EFNB2P52799 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EFNB2P52799 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.13■□□□□ 0.97
EFNB2P52799 ZNRF2P2-203ENST00000454624 420 ntBASIC21.13■□□□□ 0.97
EFNB2P52799 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.13■□□□□ 0.97
EFNB2P52799 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
EFNB2P52799 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EFNB2P52799 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms