Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHATP28329 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.91■□□□□ 0.94
CHATP28329 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CHATP28329 AC092803.2-201ENST00000564287 1899 ntBASIC20.91■□□□□ 0.94
CHATP28329 DUSP8P4-201ENST00000399538 1761 ntBASIC20.9■□□□□ 0.94
CHATP28329 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHATP28329 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHATP28329 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHATP28329 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHATP28329 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.89■□□□□ 0.93
CHATP28329 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHATP28329 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHATP28329 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.89■□□□□ 0.93
CHATP28329 AC142472.1-201ENST00000612013 1741 ntBASIC20.89■□□□□ 0.93
CHATP28329 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHATP28329 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHATP28329 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHATP28329 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHATP28329 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHATP28329 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHATP28329 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.88■□□□□ 0.93
CHATP28329 WHAMMP3-201ENST00000611636 1609 ntBASIC20.88■□□□□ 0.93
CHATP28329 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.88■□□□□ 0.93
CHATP28329 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHATP28329 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHATP28329 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.88■□□□□ 0.93
CHATP28329 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHATP28329 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.87■□□□□ 0.93
CHATP28329 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHATP28329 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHATP28329 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHATP28329 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHATP28329 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHATP28329 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHATP28329 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.86■□□□□ 0.93
CHATP28329 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.85■□□□□ 0.93
CHATP28329 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CHATP28329 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHATP28329 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHATP28329 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.85■□□□□ 0.93
CHATP28329 AC021231.2-201ENST00000594613 730 ntBASIC20.85■□□□□ 0.93
CHATP28329 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHATP28329 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHATP28329 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHATP28329 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHATP28329 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHATP28329 AC020928.2-201ENST00000588717 2197 ntBASIC20.84■□□□□ 0.93
CHATP28329 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.84■□□□□ 0.93
CHATP28329 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHATP28329 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHATP28329 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHATP28329 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHATP28329 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHATP28329 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.82■□□□□ 0.92
CHATP28329 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.82■□□□□ 0.92
CHATP28329 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHATP28329 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.82■□□□□ 0.92
CHATP28329 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHATP28329 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHATP28329 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHATP28329 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHATP28329 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.81■□□□□ 0.92
CHATP28329 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHATP28329 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.81■□□□□ 0.92
CHATP28329 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHATP28329 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHATP28329 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHATP28329 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHATP28329 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.8■□□□□ 0.92
CHATP28329 DUX4L29-201ENST00000425409 679 ntBASIC20.8■□□□□ 0.92
CHATP28329 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHATP28329 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHATP28329 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHATP28329 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.8■□□□□ 0.92
CHATP28329 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
CHATP28329 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHATP28329 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHATP28329 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHATP28329 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHATP28329 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHATP28329 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.79■□□□□ 0.92
CHATP28329 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHATP28329 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHATP28329 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHATP28329 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.78■□□□□ 0.92
CHATP28329 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHATP28329 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHATP28329 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHATP28329 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.77■□□□□ 0.92
CHATP28329 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHATP28329 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHATP28329 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.77■□□□□ 0.92
CHATP28329 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms