Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1AP19438 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF1AP19438 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TNFRSF1AP19438 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF1AP19438 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF1AP19438 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1AP19438 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TNFRSF1AP19438 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TNFRSF1AP19438 ECEL1P2-201ENST00000461596 1295 ntBASIC20.96■□□□□ 0.95
TNFRSF1AP19438 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1AP19438 AC092296.2-201ENST00000589470 999 ntBASIC20.96■□□□□ 0.95
TNFRSF1AP19438 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFRSF1AP19438 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFRSF1AP19438 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.95■□□□□ 0.94
TNFRSF1AP19438 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1AP19438 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1AP19438 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1AP19438 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1AP19438 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TNFRSF1AP19438 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1AP19438 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1AP19438 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.94■□□□□ 0.94
TNFRSF1AP19438 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1AP19438 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1AP19438 RARRES2P2-201ENST00000394842 485 ntBASIC20.93■□□□□ 0.94
TNFRSF1AP19438 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TNFRSF1AP19438 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1AP19438 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1AP19438 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFRSF1AP19438 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1AP19438 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1AP19438 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFRSF1AP19438 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF1AP19438 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TNFRSF1AP19438 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF1AP19438 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.9■□□□□ 0.94
TNFRSF1AP19438 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF1AP19438 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.89■□□□□ 0.94
TNFRSF1AP19438 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1AP19438 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.89■□□□□ 0.93
TNFRSF1AP19438 AL157400.5-201ENST00000507624 621 ntBASIC20.89■□□□□ 0.93
TNFRSF1AP19438 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1AP19438 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TNFRSF1AP19438 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1AP19438 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1AP19438 AL449106.1-201ENST00000608517 1980 ntBASIC20.88■□□□□ 0.93
TNFRSF1AP19438 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1AP19438 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 SMPD5-203ENST00000639008 1464 ntBASIC20.87■□□□□ 0.93
TNFRSF1AP19438 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1AP19438 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TNFRSF1AP19438 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TNFRSF1AP19438 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFRSF1AP19438 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1AP19438 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.86■□□□□ 0.93
TNFRSF1AP19438 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1AP19438 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.85■□□□□ 0.93
TNFRSF1AP19438 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1AP19438 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1AP19438 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1AP19438 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFRSF1AP19438 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFRSF1AP19438 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1AP19438 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1AP19438 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF1AP19438 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF1AP19438 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFRSF1AP19438 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFRSF1AP19438 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TNFRSF1AP19438 AL359504.2-201ENST00000605506 1601 ntBASIC20.82■□□□□ 0.92
TNFRSF1AP19438 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF1AP19438 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNFRSF1AP19438 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TNFRSF1AP19438 ABHD17AP5-201ENST00000580133 923 ntBASIC20.82■□□□□ 0.92
TNFRSF1AP19438 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF1AP19438 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.81■□□□□ 0.92
TNFRSF1AP19438 AC025884.2-201ENST00000553429 711 ntBASIC20.81■□□□□ 0.92
TNFRSF1AP19438 MIR3960-201ENST00000583311 91 ntBASIC20.81■□□□□ 0.92
TNFRSF1AP19438 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1AP19438 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1AP19438 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms