Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.34■■□□□ 1.33
CLDN4O14493 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLDN4O14493 AC060814.1-201ENST00000554326 538 ntBASIC23.33■■□□□ 1.33
CLDN4O14493 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLDN4O14493 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.32■■□□□ 1.32
CLDN4O14493 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLDN4O14493 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.32■■□□□ 1.32
CLDN4O14493 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLDN4O14493 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CLDN4O14493 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLDN4O14493 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.31■■□□□ 1.32
CLDN4O14493 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLDN4O14493 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.3■■□□□ 1.32
CLDN4O14493 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CLDN4O14493 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN4O14493 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CLDN4O14493 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CLDN4O14493 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
CLDN4O14493 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN4O14493 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.28■■□□□ 1.32
CLDN4O14493 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.28■■□□□ 1.32
CLDN4O14493 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN4O14493 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.27■■□□□ 1.32
CLDN4O14493 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN4O14493 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN4O14493 AL449106.1-201ENST00000608517 1980 ntBASIC23.27■■□□□ 1.32
CLDN4O14493 HSD17B1P1-201ENST00000590052 955 ntBASIC23.26■■□□□ 1.31
CLDN4O14493 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CLDN4O14493 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN4O14493 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.25■■□□□ 1.31
CLDN4O14493 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN4O14493 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN4O14493 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CLDN4O14493 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN4O14493 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN4O14493 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.23■■□□□ 1.31
CLDN4O14493 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN4O14493 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CLDN4O14493 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN4O14493 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CLDN4O14493 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CLDN4O14493 AC092296.2-201ENST00000589470 999 ntBASIC23.23■■□□□ 1.31
CLDN4O14493 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN4O14493 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN4O14493 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN4O14493 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CLDN4O14493 ECEL1P2-201ENST00000461596 1295 ntBASIC23.22■■□□□ 1.31
CLDN4O14493 RNF126P1-201ENST00000567452 1320 ntBASIC23.22■■□□□ 1.31
CLDN4O14493 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN4O14493 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.22■■□□□ 1.31
CLDN4O14493 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLDN4O14493 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLDN4O14493 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLDN4O14493 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLDN4O14493 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.2■■□□□ 1.3
CLDN4O14493 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CLDN4O14493 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN4O14493 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN4O14493 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN4O14493 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN4O14493 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.19■■□□□ 1.3
CLDN4O14493 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN4O14493 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN4O14493 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN4O14493 AL157400.5-201ENST00000507624 621 ntBASIC23.18■■□□□ 1.3
CLDN4O14493 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN4O14493 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CLDN4O14493 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN4O14493 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CLDN4O14493 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.17■■□□□ 1.3
CLDN4O14493 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN4O14493 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN4O14493 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN4O14493 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN4O14493 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN4O14493 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN4O14493 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN4O14493 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CLDN4O14493 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CLDN4O14493 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN4O14493 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN4O14493 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN4O14493 AL359504.2-201ENST00000605506 1601 ntBASIC23.15■■□□□ 1.3
CLDN4O14493 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN4O14493 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CLDN4O14493 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.14■■□□□ 1.3
CLDN4O14493 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.14■■□□□ 1.3
CLDN4O14493 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN4O14493 SMPD5-203ENST00000639008 1464 ntBASIC23.14■■□□□ 1.29
CLDN4O14493 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN4O14493 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.14■■□□□ 1.29
CLDN4O14493 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN4O14493 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN4O14493 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms