Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RNF223E7ERA6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF223E7ERA6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF223E7ERA6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF223E7ERA6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF223E7ERA6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF223E7ERA6 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF223E7ERA6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF223E7ERA6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF223E7ERA6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RNF223E7ERA6 MIR3960-201ENST00000583311 91 ntBASIC20.74■□□□□ 0.91
RNF223E7ERA6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF223E7ERA6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF223E7ERA6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF223E7ERA6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF223E7ERA6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF223E7ERA6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF223E7ERA6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF223E7ERA6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF223E7ERA6 AC018755.3-202ENST00000596210 929 ntBASIC20.72■□□□□ 0.91
RNF223E7ERA6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF223E7ERA6 AC131212.1-201ENST00000613771 668 ntBASIC20.72■□□□□ 0.91
RNF223E7ERA6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF223E7ERA6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF223E7ERA6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF223E7ERA6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF223E7ERA6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF223E7ERA6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF223E7ERA6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF223E7ERA6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF223E7ERA6 AC103834.1-201ENST00000520383 144 ntBASIC20.7■□□□□ 0.9
RNF223E7ERA6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.7■□□□□ 0.9
RNF223E7ERA6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF223E7ERA6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF223E7ERA6 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF223E7ERA6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF223E7ERA6 PVT1_1.1-201ENST00000615125 194 ntBASIC20.68■□□□□ 0.9
RNF223E7ERA6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF223E7ERA6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF223E7ERA6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF223E7ERA6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF223E7ERA6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF223E7ERA6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF223E7ERA6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF223E7ERA6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
RNF223E7ERA6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF223E7ERA6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF223E7ERA6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF223E7ERA6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF223E7ERA6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF223E7ERA6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF223E7ERA6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF223E7ERA6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF223E7ERA6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF223E7ERA6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF223E7ERA6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF223E7ERA6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF223E7ERA6 AC019069.1-201ENST00000610008 1333 ntBASIC20.64■□□□□ 0.89
RNF223E7ERA6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF223E7ERA6 THA1P-201ENST00000590384 1145 ntBASIC20.64■□□□□ 0.89
RNF223E7ERA6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
RNF223E7ERA6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF223E7ERA6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF223E7ERA6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF223E7ERA6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF223E7ERA6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF223E7ERA6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF223E7ERA6 GUSBP5-201ENST00000418136 578 ntBASIC20.62■□□□□ 0.89
RNF223E7ERA6 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.62■□□□□ 0.89
RNF223E7ERA6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF223E7ERA6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF223E7ERA6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF223E7ERA6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF223E7ERA6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF223E7ERA6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF223E7ERA6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF223E7ERA6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF223E7ERA6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF223E7ERA6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF223E7ERA6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF223E7ERA6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF223E7ERA6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF223E7ERA6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF223E7ERA6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RNF223E7ERA6 MIR4508-201ENST00000584178 70 ntBASIC20.6■□□□□ 0.89
RNF223E7ERA6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF223E7ERA6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF223E7ERA6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
RNF223E7ERA6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF223E7ERA6 ABCB10P3-201ENST00000561950 2166 ntBASIC20.59■□□□□ 0.89
RNF223E7ERA6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF223E7ERA6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RNF223E7ERA6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF223E7ERA6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF223E7ERA6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RNF223E7ERA6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF223E7ERA6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
RNF223E7ERA6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF223E7ERA6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF223E7ERA6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms