Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPIPB4C9JG80 HLA-V-202ENST00000446817 847 ntBASIC22.03■■□□□ 1.12
NPIPB4C9JG80 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPIPB4C9JG80 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPIPB4C9JG80 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPIPB4C9JG80 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPB4C9JG80 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPB4C9JG80 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPB4C9JG80 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPB4C9JG80 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.02■■□□□ 1.12
NPIPB4C9JG80 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPB4C9JG80 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NPIPB4C9JG80 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NPIPB4C9JG80 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.02■■□□□ 1.11
NPIPB4C9JG80 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPB4C9JG80 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPB4C9JG80 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPB4C9JG80 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22■■□□□ 1.11
NPIPB4C9JG80 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPIPB4C9JG80 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22■■□□□ 1.11
NPIPB4C9JG80 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
NPIPB4C9JG80 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPB4C9JG80 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPB4C9JG80 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPB4C9JG80 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.98■■□□□ 1.11
NPIPB4C9JG80 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPIPB4C9JG80 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.98■■□□□ 1.11
NPIPB4C9JG80 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPB4C9JG80 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.97■■□□□ 1.11
NPIPB4C9JG80 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.97■■□□□ 1.11
NPIPB4C9JG80 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
NPIPB4C9JG80 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.96■■□□□ 1.11
NPIPB4C9JG80 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.95■■□□□ 1.1
NPIPB4C9JG80 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPB4C9JG80 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPB4C9JG80 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.94■■□□□ 1.1
NPIPB4C9JG80 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPB4C9JG80 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPB4C9JG80 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.94■■□□□ 1.1
NPIPB4C9JG80 AC091060.1-201ENST00000623524 1766 ntBASIC21.94■■□□□ 1.1
NPIPB4C9JG80 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.93■■□□□ 1.1
NPIPB4C9JG80 AC016575.1-201ENST00000607026 382 ntBASIC21.93■■□□□ 1.1
NPIPB4C9JG80 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPB4C9JG80 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPIPB4C9JG80 AC145676.1-201ENST00000514988 2004 ntBASIC21.91■■□□□ 1.1
NPIPB4C9JG80 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NPIPB4C9JG80 AL359258.2-201ENST00000564063 1566 ntBASIC21.91■■□□□ 1.1
NPIPB4C9JG80 AC126177.7-201ENST00000547904 679 ntBASIC21.9■■□□□ 1.1
NPIPB4C9JG80 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.9■■□□□ 1.1
NPIPB4C9JG80 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.9■■□□□ 1.1
NPIPB4C9JG80 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPB4C9JG80 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPB4C9JG80 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.89■■□□□ 1.1
NPIPB4C9JG80 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPB4C9JG80 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.89■■□□□ 1.1
NPIPB4C9JG80 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPB4C9JG80 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.89■■□□□ 1.09
NPIPB4C9JG80 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NPIPB4C9JG80 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
NPIPB4C9JG80 MIR7108-201ENST00000614319 87 ntBASIC21.89■■□□□ 1.09
NPIPB4C9JG80 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.89■■□□□ 1.09
NPIPB4C9JG80 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPB4C9JG80 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPB4C9JG80 AC092803.2-201ENST00000564287 1899 ntBASIC21.88■■□□□ 1.09
NPIPB4C9JG80 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPB4C9JG80 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.87■■□□□ 1.09
NPIPB4C9JG80 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPB4C9JG80 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.87■■□□□ 1.09
NPIPB4C9JG80 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms