Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CR559946.2-201ENST00000623684 991 ntBASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 MIR219A2-201ENST00000608502 1504 ntBASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AC142472.1-201ENST00000612013 1741 ntBASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AC148477.6-201ENST00000623746 465 ntBASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.15■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.14■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.14■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 HLA-V-202ENST00000446817 847 ntBASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC091060.1-201ENST00000623524 1766 ntBASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MIR3648-2-201ENST00000581792 180 ntBASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MIR3648-1-201ENST00000615959 180 ntBASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AC016575.1-201ENST00000607026 382 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms