Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.19■□□□□ 0.82
SAA2-SAA4A0A096LPE2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SAA2-SAA4A0A096LPE2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CR559946.2-201ENST00000623684 991 ntBASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 MIR219A2-201ENST00000608502 1504 ntBASIC20.17■□□□□ 0.82
SAA2-SAA4A0A096LPE2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AC142472.1-201ENST00000612013 1741 ntBASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AC148477.6-201ENST00000623746 465 ntBASIC20.16■□□□□ 0.82
SAA2-SAA4A0A096LPE2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.15■□□□□ 0.82
SAA2-SAA4A0A096LPE2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.14■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.14■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 HLA-V-202ENST00000446817 847 ntBASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SAA2-SAA4A0A096LPE2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC091060.1-201ENST00000623524 1766 ntBASIC20.11■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MIR3648-2-201ENST00000581792 180 ntBASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MIR3648-1-201ENST00000615959 180 ntBASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA2-SAA4A0A096LPE2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SAA2-SAA4A0A096LPE2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.08■□□□□ 0.81
SAA2-SAA4A0A096LPE2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA2-SAA4A0A096LPE2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.06■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AC016575.1-201ENST00000607026 382 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms