Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC9.13□□□□□ -0.951e-7■□□□□ 9.5
SUB1P53999 MIR1227-201ENST00000408484 88 ntBASIC9.12□□□□□ -0.951e-7■□□□□ 9.5
SUB1P53999 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC8.99□□□□□ -0.975e-9■□□□□ 9.5
SUB1P53999 TMUB1-207ENST00000492838 550 ntTSL 58.5□□□□□ -1.051e-7■□□□□ 9.5
SUB1P53999 PABPC1-224ENST00000610907 1569 ntTSL 1 (best) BASIC8.49□□□□□ -1.051e-11■□□□□ 9.5
SUB1P53999 TALDO1-209ENST00000533796 503 ntTSL 28.46□□□□□ -1.065e-6■□□□□ 9.5
SUB1P53999 PABPC1-203ENST00000517921 885 ntTSL 58.32□□□□□ -1.081e-11■□□□□ 9.5
SUB1P53999 TALDO1-204ENST00000530119 1191 ntTSL 28.32□□□□□ -1.085e-6■□□□□ 9.5
SUB1P53999 GSTP1-203ENST00000467591 736 ntTSL 28.29□□□□□ -1.081e-15■□□□□ 9.5
SUB1P53999 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.135e-6■□□□□ 9.5
SUB1P53999 TALDO1-205ENST00000530440 710 ntTSL 37.89□□□□□ -1.155e-6■□□□□ 9.5
SUB1P53999 GSTP1-207ENST00000498765 723 ntTSL 37.66□□□□□ -1.181e-15■□□□□ 9.5
SUB1P53999 PABPC1-222ENST00000523555 522 ntTSL 37.09□□□□□ -1.271e-11■□□□□ 9.5
SUB1P53999 EIF4B-207ENST00000549645 590 ntTSL 46.72□□□□□ -1.335e-9■□□□□ 9.5
SUB1P53999 EIF4B-209ENST00000550390 871 ntTSL 56.56□□□□□ -1.365e-9■□□□□ 9.5
SUB1P53999 EIF4B-213ENST00000552490 841 ntTSL 26.46□□□□□ -1.385e-9■□□□□ 9.5
SUB1P53999 TRAPPC3-206ENST00000469757 221 ntTSL 26.3□□□□□ -1.45e-9■□□□□ 9.5
SUB1P53999 EIF4B-212ENST00000551527 769 ntTSL 45.39□□□□□ -1.555e-9■□□□□ 9.5
SUB1P53999 TAF12-203ENST00000471683 844 ntTSL 35.24□□□□□ -1.575e-6■□□□□ 9.5
SUB1P53999 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.635e-6■□□□□ 9.5
SUB1P53999 EIF4B-204ENST00000549077 885 ntTSL 54.78□□□□□ -1.645e-9■□□□□ 9.5
SUB1P53999 EIF4B-211ENST00000551002 537 ntTSL 44.26□□□□□ -1.735e-9■□□□□ 9.5
SUB1P53999 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.795e-6■□□□□ 9.5
SUB1P53999 PABPC1-209ENST00000519100 851 ntTSL 31.77□□□□□ -2.131e-11■□□□□ 9.5
SUB1P53999 EIF4B-208ENST00000550025 465 ntTSL 21.62□□□□□ -2.155e-9■□□□□ 9.5
SUB1P53999 RPS2-211ENST00000531065 1548 ntTSL 520.63■□□□□ 0.891e-10■□□□□ 9.5
SUB1P53999 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.3■□□□□ 0.841e-10■□□□□ 9.5
SUB1P53999 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.55■□□□□ 0.721e-10■□□□□ 9.5
SUB1P53999 RPS2-206ENST00000527302 719 ntTSL 319.53■□□□□ 0.721e-10■□□□□ 9.5
SUB1P53999 RPS2-215ENST00000533872 1114 ntTSL 518.91■□□□□ 0.621e-10■□□□□ 9.5
SUB1P53999 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.57■□□□□ 0.561e-10■□□□□ 9.5
SUB1P53999 RPS2-205ENST00000527109 1030 ntTSL 1 (best)18.57■□□□□ 0.561e-10■□□□□ 9.5
SUB1P53999 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.531e-10■□□□□ 9.5
SUB1P53999 RPS2-208ENST00000527871 1243 ntTSL 1 (best)17.74■□□□□ 0.431e-10■□□□□ 9.5
SUB1P53999 RPS2-213ENST00000533161 1186 ntTSL 1 (best)17.09■□□□□ 0.331e-10■□□□□ 9.5
SUB1P53999 RPS2-204ENST00000526908 638 ntTSL 214.91□□□□□ -0.021e-10■□□□□ 9.5
SUB1P53999 RPS2-216ENST00000534461 734 ntTSL 213.39□□□□□ -0.271e-10■□□□□ 9.5
SUB1P53999 RPS2-203ENST00000526586 878 ntTSL 26.78□□□□□ -1.321e-10■□□□□ 9.5
SUB1P53999 RPS2-212ENST00000532746 931 ntTSL 36.52□□□□□ -1.371e-10■□□□□ 9.5
SUB1P53999 RPS2-214ENST00000533186 625 ntTSL 36.52□□□□□ -1.371e-10■□□□□ 9.5
SUB1P53999 MAN2A2-203ENST00000557990 956 ntTSL 510.01□□□□□ -0.812e-6■□□□□ 9.5
SUB1P53999 MAN2A2-230ENST00000561448 1443 ntTSL 28.27□□□□□ -1.092e-6■□□□□ 9.5
SUB1P53999 MAN2A2-219ENST00000560147 492 ntTSL 46.71□□□□□ -1.342e-6■□□□□ 9.5
SUB1P53999 MED15-222ENST00000473244 2733 ntTSL 1 (best)15.67■□□□□ 0.13e-6■□□□□ 9.5
SUB1P53999 MED15-231ENST00000493216 4701 ntTSL 215.42■□□□□ 0.063e-6■□□□□ 9.5
SUB1P53999 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.433e-6■□□□□ 9.5
SUB1P53999 MED15-211ENST00000433831 3267 ntTSL 511.52□□□□□ -0.563e-6■□□□□ 9.5
SUB1P53999 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.37□□□□□ -0.593e-6■□□□□ 9.5
SUB1P53999 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.713e-6■□□□□ 9.5
SUB1P53999 MED15-229ENST00000489651 3563 ntTSL 1 (best)9.52□□□□□ -0.893e-6■□□□□ 9.5
SUB1P53999 MED15-230ENST00000492381 3619 ntTSL 28.81□□□□□ -13e-6■□□□□ 9.5
SUB1P53999 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.591e-12■□□□□ 9.5
SUB1P53999 EIF2AK1-202ENST00000422786 782 ntTSL 38.34□□□□□ -1.071e-12■□□□□ 9.5
SUB1P53999 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.55■□□□□ 0.565e-6■□□□□ 9.4
SUB1P53999 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.35e-6■□□□□ 9.4
SUB1P53999 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.265e-6■□□□□ 9.4
SUB1P53999 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.155e-6■□□□□ 9.4
SUB1P53999 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.025e-6■□□□□ 9.4
SUB1P53999 HSPA8-213ENST00000530391 648 ntTSL 314.9□□□□□ -0.023e-14■□□□□ 9.4
SUB1P53999 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.59□□□□□ -0.071e-15■□□□□ 9.4
SUB1P53999 TXNRD2-217ENST00000496729 910 ntTSL 414.56□□□□□ -0.085e-6■□□□□ 9.4
SUB1P53999 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.33□□□□□ -0.121e-11■□□□□ 9.4
SUB1P53999 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)14.25□□□□□ -0.131e-7■□□□□ 9.4
SUB1P53999 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.74□□□□□ -0.215e-6■□□□□ 9.4
SUB1P53999 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.22□□□□□ -0.295e-6■□□□□ 9.4
SUB1P53999 HSPG2-204ENST00000412328 828 ntTSL 212.96□□□□□ -0.331e-7■□□□□ 9.4
SUB1P53999 EBNA1BP2-208ENST00000483082 759 ntTSL 212.82□□□□□ -0.365e-6■□□□□ 9.4
SUB1P53999 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.371e-11■□□□□ 9.4
SUB1P53999 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.415e-6■□□□□ 9.4
SUB1P53999 EBNA1BP2-206ENST00000472982 1008 ntTSL 212.16□□□□□ -0.465e-6■□□□□ 9.4
SUB1P53999 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.22□□□□□ -0.611e-7■□□□□ 9.4
SUB1P53999 TARDBP-231ENST00000639599 1283 ntTSL 510.85□□□□□ -0.671e-11■□□□□ 9.4
SUB1P53999 MAT2A-205ENST00000481412 1438 ntTSL 1 (best)10.38□□□□□ -0.755e-6■□□□□ 9.4
SUB1P53999 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC10.03□□□□□ -0.81e-11■□□□□ 9.4
SUB1P53999 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC9.74□□□□□ -0.855e-6■□□□□ 9.4
SUB1P53999 EBNA1BP2-209ENST00000491223 680 ntTSL 29.71□□□□□ -0.865e-6■□□□□ 9.4
SUB1P53999 FAM96A-205ENST00000559705 636 ntTSL 39.59□□□□□ -0.871e-7■□□□□ 9.4
SUB1P53999 PGAM1-202ENST00000467867 1187 ntTSL 29.33□□□□□ -0.925e-6■□□□□ 9.4
SUB1P53999 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC9.22□□□□□ -0.931e-11■□□□□ 9.4
SUB1P53999 TARDBP-226ENST00000621790 1008 ntTSL 5 BASIC9.22□□□□□ -0.931e-11■□□□□ 9.4
SUB1P53999 HSPG2-206ENST00000439717 637 ntTSL 29.06□□□□□ -0.961e-7■□□□□ 9.4
SUB1P53999 TARDBP-206ENST00000473869 1946 ntTSL 58.66□□□□□ -1.021e-11■□□□□ 9.4
SUB1P53999 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.031e-7■□□□□ 9.4
SUB1P53999 TARDBP-230ENST00000639083 2269 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.031e-11■□□□□ 9.4
SUB1P53999 HSPA8-217ENST00000532182 674 ntTSL 48.52□□□□□ -1.053e-14■□□□□ 9.4
SUB1P53999 EBNA1BP2-203ENST00000461557 741 ntTSL 58.2□□□□□ -1.15e-6■□□□□ 9.4
SUB1P53999 TARDBP-221ENST00000619555 682 ntTSL 58.19□□□□□ -1.11e-11■□□□□ 9.4
SUB1P53999 TARDBP-223ENST00000620632 706 ntTSL 38.19□□□□□ -1.11e-11■□□□□ 9.4
SUB1P53999 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.141e-7■□□□□ 9.4
SUB1P53999 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC7.89□□□□□ -1.151e-7■□□□□ 9.4
SUB1P53999 SMAP2-201ENST00000372708 2473 ntTSL 1 (best)7.88□□□□□ -1.151e-7■□□□□ 9.4
SUB1P53999 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.195e-6■□□□□ 9.4
SUB1P53999 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC7.51□□□□□ -1.211e-7■□□□□ 9.4
SUB1P53999 SND1-211ENST00000484767 460 ntTSL 47.5□□□□□ -1.215e-6■□□□□ 9.4
SUB1P53999 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC7.48□□□□□ -1.211e-11■□□□□ 9.4
SUB1P53999 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC7.41□□□□□ -1.221e-7■□□□□ 9.4
SUB1P53999 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.231e-7■□□□□ 9.4
SUB1P53999 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.255e-6■□□□□ 9.4
SUB1P53999 TARDBP-218ENST00000617172 980 ntTSL 57.22□□□□□ -1.251e-11■□□□□ 9.4
SUB1P53999 TARDBP-211ENST00000610369 563 ntTSL 57.22□□□□□ -1.251e-11■□□□□ 9.4
Retrieved 100 of 11,644 protein–RNA pairs in 252.8 ms