RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
TARDBP-231ENST00000639599 ABCC9O60706 1549 aa32.69■■■□□ 2.82
TARDBP-231ENST00000639599 CCDC180Q9P1Z9 1646 aa32.6■■■□□ 2.81
TARDBP-231ENST00000639599 RB1CC1Q8TDY2 1594 aa31.12■■■□□ 2.57
TARDBP-231ENST00000639599 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
TARDBP-231ENST00000639599 NACADO15069 1562 aa30.88■■■□□ 2.53
TARDBP-231ENST00000639599 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
TARDBP-231ENST00000639599 PABPN1Q86U42 306 aaKnown RBP eCLIP30.47■■■□□ 2.47
TARDBP-231ENST00000639599 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
TARDBP-231ENST00000639599 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
TARDBP-231ENST00000639599 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
TARDBP-231ENST00000639599 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
TARDBP-231ENST00000639599 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
TARDBP-231ENST00000639599 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
TARDBP-231ENST00000639599 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
TARDBP-231ENST00000639599 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
TARDBP-231ENST00000639599 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
TARDBP-231ENST00000639599 EIF4G1Q04637 1599 aaKnown RBP29.42■■■□□ 2.3
TARDBP-231ENST00000639599 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
TARDBP-231ENST00000639599 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
TARDBP-231ENST00000639599 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
TARDBP-231ENST00000639599 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
TARDBP-231ENST00000639599 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
TARDBP-231ENST00000639599 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
TARDBP-231ENST00000639599 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
TARDBP-231ENST00000639599 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
TARDBP-231ENST00000639599 CUX2O14529 1486 aa28.18■■■□□ 2.1
TARDBP-231ENST00000639599 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
TARDBP-231ENST00000639599 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
TARDBP-231ENST00000639599 NESP48681 1621 aa28.02■■■□□ 2.08
TARDBP-231ENST00000639599 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
TARDBP-231ENST00000639599 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
TARDBP-231ENST00000639599 PDS5BQ9NTI5 1447 aa27.81■■■□□ 2.04
TARDBP-231ENST00000639599 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
TARDBP-231ENST00000639599 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
TARDBP-231ENST00000639599 WIZO95785 1651 aa27.65■■■□□ 2.02
TARDBP-231ENST00000639599 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
TARDBP-231ENST00000639599 MRC2Q9UBG0 1479 aa27.51■■■□□ 2
TARDBP-231ENST00000639599 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
TARDBP-231ENST00000639599 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
TARDBP-231ENST00000639599 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
TARDBP-231ENST00000639599 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
TARDBP-231ENST00000639599 WDR62O43379 1518 aa27.37■■□□□ 1.97
TARDBP-231ENST00000639599 CFTRP13569 1480 aa27.32■■□□□ 1.96
TARDBP-231ENST00000639599 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
TARDBP-231ENST00000639599 CCDC88BA6NC98 1476 aa27.06■■□□□ 1.92
TARDBP-231ENST00000639599 TRIM41Q8WV44 630 aa27.03■■□□□ 1.92
TARDBP-231ENST00000639599 OSCARQ8IYS5 282 aa26.96■■□□□ 1.91
TARDBP-231ENST00000639599 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
TARDBP-231ENST00000639599 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
TARDBP-231ENST00000639599 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
TARDBP-231ENST00000639599 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
TARDBP-231ENST00000639599 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
TARDBP-231ENST00000639599 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
TARDBP-231ENST00000639599 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
TARDBP-231ENST00000639599 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
TARDBP-231ENST00000639599 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.842e-7■■□□□ 14.3
TARDBP-231ENST00000639599 FBLN2P98095 1184 aa26.54■■□□□ 1.84
TARDBP-231ENST00000639599 SOGA1O94964 1423 aa26.49■■□□□ 1.83
TARDBP-231ENST00000639599 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
TARDBP-231ENST00000639599 RIMBP3CA6NJZ7 1639 aa26.46■■□□□ 1.83
TARDBP-231ENST00000639599 RIMBP3BA6NNM3 1639 aa26.46■■□□□ 1.83
TARDBP-231ENST00000639599 RIMBP3Q9UFD9 1639 aa26.46■■□□□ 1.83
TARDBP-231ENST00000639599 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
TARDBP-231ENST00000639599 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
TARDBP-231ENST00000639599 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
TARDBP-231ENST00000639599 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
TARDBP-231ENST00000639599 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
TARDBP-231ENST00000639599 CHD1O14646 1710 aa26.34■■□□□ 1.81
TARDBP-231ENST00000639599 CYB5RLQ6IPT4 315 aa26.33■■□□□ 1.81
TARDBP-231ENST00000639599 CUX1P39880 1505 aa26.33■■□□□ 1.81
TARDBP-231ENST00000639599 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
TARDBP-231ENST00000639599 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
TARDBP-231ENST00000639599 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
TARDBP-231ENST00000639599 GRIN2BQ13224 1484 aa26.26■■□□□ 1.79
TARDBP-231ENST00000639599 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
TARDBP-231ENST00000639599 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
TARDBP-231ENST00000639599 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
TARDBP-231ENST00000639599 GAPVD1Q14C86 1478 aa26.16■■□□□ 1.78
TARDBP-231ENST00000639599 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
TARDBP-231ENST00000639599 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
TARDBP-231ENST00000639599 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
TARDBP-231ENST00000639599 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.776e-7■□□□□ 11.3
TARDBP-231ENST00000639599 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
TARDBP-231ENST00000639599 PBRM1Q86U86 1689 aa26.03■■□□□ 1.76
TARDBP-231ENST00000639599 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
TARDBP-231ENST00000639599 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
TARDBP-231ENST00000639599 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
TARDBP-231ENST00000639599 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
TARDBP-231ENST00000639599 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
TARDBP-231ENST00000639599 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
TARDBP-231ENST00000639599 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
TARDBP-231ENST00000639599 NUP160Q12769 1436 aa25.77■■□□□ 1.72
TARDBP-231ENST00000639599 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
TARDBP-231ENST00000639599 ERCC6L2Q5T890 1561 aa25.64■■□□□ 1.69
TARDBP-231ENST00000639599 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
TARDBP-231ENST00000639599 JPH4Q96JJ6 628 aa25.58■■□□□ 1.69
TARDBP-231ENST00000639599 SHROOM2Q13796 1616 aa25.56■■□□□ 1.68
TARDBP-231ENST00000639599 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
TARDBP-231ENST00000639599 NPM1P06748 294 aaKnown RBP eCLIP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms