RNA–Protein interactions for RNA: ENST00000533161.5

RPS2-213, Transcript of ribosomal protein S2, humanhuman

TSL 1 (best)

Gene RPS2, Length 1,186 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS2-213ENST00000533161 NISCHQ9Y2I1 1504 aa60.45■■■■■ 7.27
RPS2-213ENST00000533161 ABCC9O60706 1549 aa54.61■■■■■ 6.33
RPS2-213ENST00000533161 CCDC180Q9P1Z9 1646 aa54.55■■■■■ 6.32
RPS2-213ENST00000533161 RB1CC1Q8TDY2 1594 aa51.95■■■■■ 5.91
RPS2-213ENST00000533161 NACADO15069 1562 aa51.51■■■■■ 5.84
RPS2-213ENST00000533161 DNAJC5BQ9UF47 199 aa51.36■■■■■ 5.81
RPS2-213ENST00000533161 UNC13AQ9UPW8 1703 aa50.97■■■■■ 5.75
RPS2-213ENST00000533161 DCAF8L2P0C7V8 631 aa50.89■■■■■ 5.74
RPS2-213ENST00000533161 MYO15BQ96JP2 1530 aa50.71■■■■■ 5.71
RPS2-213ENST00000533161 PABPN1Q86U42 306 aaKnown RBP eCLIP50.67■■■■■ 5.7
RPS2-213ENST00000533161 BICRAQ9NZM4 1560 aa50.47■■■■■ 5.67
RPS2-213ENST00000533161 ZCCHC6Q5VYS8 1495 aaKnown RBP50.08■■■■■ 5.61
RPS2-213ENST00000533161 DCAF1Q9Y4B6 1507 aa49.95■■■■■ 5.59
RPS2-213ENST00000533161 SHROOM4Q9ULL8 1493 aa49.76■■■■■ 5.56
RPS2-213ENST00000533161 SCRIBQ14160 1630 aa49.59■■■■■ 5.53
RPS2-213ENST00000533161 CC2D2AQ9P2K1 1620 aa49.42■■■■■ 5.5
RPS2-213ENST00000533161 EIF4G1Q04637 1599 aaKnown RBP49.24■■■■■ 5.47
RPS2-213ENST00000533161 CECR2Q9BXF3 1484 aa49.23■■■■■ 5.47
RPS2-213ENST00000533161 NCAPD3P42695 1498 aa47.48■■■■■ 5.19
RPS2-213ENST00000533161 DNAJC5Q9H3Z4 198 aa47.37■■■■■ 5.17
RPS2-213ENST00000533161 SMARCA4P51532 1647 aa47.3■■■■■ 5.16
RPS2-213ENST00000533161 ATAD2BQ9ULI0 1458 aa47.3■■■■■ 5.16
RPS2-213ENST00000533161 CUX2O14529 1486 aa47.23■■■■■ 5.15
RPS2-213ENST00000533161 HMGXB3Q12766 1538 aa47.22■■■■■ 5.15
RPS2-213ENST00000533161 SMARCA2P51531 1590 aa47.22■■■■■ 5.15
RPS2-213ENST00000533161 ERCC6Q03468 1493 aa47.17■■■■■ 5.14
RPS2-213ENST00000533161 BAZ1AQ9NRL2 1556 aaPredicted RBP46.98■■■■■ 5.11
RPS2-213ENST00000533161 BAZ1BQ9UIG0 1483 aaKnown RBP46.86■■■■■ 5.09
RPS2-213ENST00000533161 NESP48681 1621 aa46.86■■■■■ 5.09
RPS2-213ENST00000533161 PEG3Q9GZU2 1588 aa46.85■■■■■ 5.09
RPS2-213ENST00000533161 THOC2Q8NI27 1593 aaKnown RBP46.58■■■■■ 5.05
RPS2-213ENST00000533161 MROH2BQ7Z745 1585 aa46.57■■■■■ 5.05
RPS2-213ENST00000533161 LAMC3Q9Y6N6 1575 aa46.56■■■■■ 5.04
RPS2-213ENST00000533161 KIF21AQ7Z4S6 1674 aa46.41■■■■■ 5.02
RPS2-213ENST00000533161 PDS5BQ9NTI5 1447 aa46.17■■■■■ 4.98
RPS2-213ENST00000533161 WIZO95785 1651 aa46.08■■■■■ 4.97
RPS2-213ENST00000533161 CADPSQ9ULU8 1353 aa45.97■■■■■ 4.95
RPS2-213ENST00000533161 MRC2Q9UBG0 1479 aa45.86■■■■■ 4.93
RPS2-213ENST00000533161 WDR62O43379 1518 aa45.82■■■■■ 4.92
RPS2-213ENST00000533161 CEP164Q9UPV0 1460 aa45.62■■■■■ 4.89
RPS2-213ENST00000533161 FANCD2Q9BXW9 1451 aa45.52■■■■■ 4.88
RPS2-213ENST00000533161 CFTRP13569 1480 aa45.45■■■■■ 4.87
RPS2-213ENST00000533161 TOP2AP11388 1531 aaKnown RBP45.45■■■■■ 4.87
RPS2-213ENST00000533161 RSF1Q96T23 1441 aaPredicted RBP45.43■■■■■ 4.86
RPS2-213ENST00000533161 PRDM2Q13029 1718 aa45.27■■■■■ 4.84
RPS2-213ENST00000533161 URB2Q14146 1524 aaKnown RBP45.2■■■■■ 4.83
RPS2-213ENST00000533161 TRIM41Q8WV44 630 aa45.15■■■■■ 4.82
RPS2-213ENST00000533161 OSCARQ8IYS5 282 aa44.85■■■■■ 4.77
RPS2-213ENST00000533161 CCDC88BA6NC98 1476 aa44.85■■■■■ 4.77
RPS2-213ENST00000533161 IFT140Q96RY7 1462 aa44.69■■■■■ 4.74
RPS2-213ENST00000533161 TOPBP1Q92547 1522 aa44.65■■■■■ 4.74
RPS2-213ENST00000533161 ZNF608Q9ULD9 1512 aaPredicted RBP44.65■■■■■ 4.74
RPS2-213ENST00000533161 RIMBP3CA6NJZ7 1639 aa44.54■■■■■ 4.72
RPS2-213ENST00000533161 RIMBP3BA6NNM3 1639 aa44.54■■■■■ 4.72
RPS2-213ENST00000533161 RIMBP3Q9UFD9 1639 aa44.54■■■■■ 4.72
RPS2-213ENST00000533161 EIF4G3O43432 1585 aaKnown RBP44.52■■■■■ 4.72
RPS2-213ENST00000533161 DNMBPQ6XZF7 1577 aa44.52■■■■■ 4.72
RPS2-213ENST00000533161 ABCC8Q09428 1581 aa44.51■■■■■ 4.72
RPS2-213ENST00000533161 TARBP1Q13395 1621 aaKnown RBP44.35■■■■■ 4.69
RPS2-213ENST00000533161 ARHGEF11O15085 1522 aa44.31■■■■■ 4.68
RPS2-213ENST00000533161 CHD1O14646 1710 aa44.3■■■■■ 4.68
RPS2-213ENST00000533161 POLA1P09884 1462 aaPredicted RBP44.18■■■■■ 4.66
RPS2-213ENST00000533161 AQRO60306 1485 aaKnown RBP eCLIP44.16■■■■■ 4.66not detected■■■■■ 54.3
RPS2-213ENST00000533161 RAD54L2Q9Y4B4 1467 aa43.97■■■■■ 4.63
RPS2-213ENST00000533161 WDR97A6NE52 1622 aa43.91■■■■■ 4.62
RPS2-213ENST00000533161 SOGA1O94964 1423 aa43.88■■■■■ 4.61
RPS2-213ENST00000533161 FGD5Q6ZNL6 1462 aa43.86■■■■■ 4.61
RPS2-213ENST00000533161 ARAP1Q96P48 1450 aa43.85■■■■■ 4.61
RPS2-213ENST00000533161 FBLN2P98095 1184 aa43.82■■■■■ 4.61
RPS2-213ENST00000533161 TDRD9Q8NDG6 1382 aaKnown RBP43.81■■■■■ 4.6
RPS2-213ENST00000533161 CYB5RLQ6IPT4 315 aa43.81■■■■■ 4.6
RPS2-213ENST00000533161 CUX1P39880 1505 aa43.79■■■■■ 4.6
RPS2-213ENST00000533161 SNAPC4Q5SXM2 1469 aa43.77■■■■■ 4.6
RPS2-213ENST00000533161 CLASP1Q7Z460 1538 aa43.7■■■■■ 4.59
RPS2-213ENST00000533161 MAGI1Q96QZ7 1491 aaPredicted RBP43.66■■■■■ 4.58
RPS2-213ENST00000533161 SYNJ1O43426 1573 aa43.63■■■■■ 4.57
RPS2-213ENST00000533161 PBRM1Q86U86 1689 aa43.6■■■■■ 4.57
RPS2-213ENST00000533161 GRIN2BQ13224 1484 aa43.59■■■■■ 4.57
RPS2-213ENST00000533161 SYNJ2O15056 1496 aa43.51■■■■■ 4.56
RPS2-213ENST00000533161 CHMP7Q8WUX9 453 aaPredicted RBP43.47■■■■■ 4.55
RPS2-213ENST00000533161 ABCA5Q8WWZ7 1642 aa43.42■■■■■ 4.54
RPS2-213ENST00000533161 TRHP20396 242 aaPredicted RBP43.41■■■■■ 4.54
RPS2-213ENST00000533161 GAPVD1Q14C86 1478 aa43.39■■■■■ 4.54
RPS2-213ENST00000533161 ABCA10Q8WWZ4 1543 aa43.35■■■■■ 4.53
RPS2-213ENST00000533161 BIVM-ERCC5R4GMW8 1640 aa43.12■■■■■ 4.49
RPS2-213ENST00000533161 ADAMTS12P58397 1594 aa43.09■■■■■ 4.49
RPS2-213ENST00000533161 SUPT5HO00267 1087 aaKnown RBP43.07■■■■■ 4.49
RPS2-213ENST00000533161 GRIN2AQ12879 1464 aa43.06■■■■■ 4.48
RPS2-213ENST00000533161 TOP2BQ02880 1626 aa43.06■■■■■ 4.48
RPS2-213ENST00000533161 WRNQ14191 1432 aaPredicted RBP eCLIP43.05■■■■■ 4.48not detected■■■■□ 25.1
RPS2-213ENST00000533161 CEP170Q5SW79 1584 aa42.98■■■■■ 4.47
RPS2-213ENST00000533161 ERCC6L2Q5T890 1561 aa42.97■■■■■ 4.47
RPS2-213ENST00000533161 NUP160Q12769 1436 aa42.92■■■■■ 4.46
RPS2-213ENST00000533161 SHROOM2Q13796 1616 aa42.88■■■■■ 4.45
RPS2-213ENST00000533161 ERICH3Q5RHP9 1530 aa42.82■■■■■ 4.45
RPS2-213ENST00000533161 FHAD1B1AJZ9 1412 aa42.81■■■■■ 4.44
RPS2-213ENST00000533161 KIF13AQ9H1H9 1805 aa42.52■■■■■ 4.4
RPS2-213ENST00000533161 RUSC2Q8N2Y8 1516 aa42.51■■■■■ 4.4
RPS2-213ENST00000533161 PRG4Q92954 1404 aaPredicted RBP42.47■■■■■ 4.39
RPS2-213ENST00000533161 AEBP2Q6ZN18 517 aaPredicted RBP42.35■■■■■ 4.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms