RNA–Protein interactions for RNA: ENST00000539317.2

SMAP2-205, Transcript of small ArfGAP2, humanhuman

TSL 2 BASIC

Gene SMAP2, Length 2,501 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAP2-205ENST00000539317 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
SMAP2-205ENST00000539317 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
SMAP2-205ENST00000539317 ABCC9O60706 1549 aa21.78■■□□□ 1.08
SMAP2-205ENST00000539317 NACADO15069 1562 aa21.16■□□□□ 0.98
SMAP2-205ENST00000539317 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.98
SMAP2-205ENST00000539317 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.97
SMAP2-205ENST00000539317 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
SMAP2-205ENST00000539317 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
SMAP2-205ENST00000539317 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
SMAP2-205ENST00000539317 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
SMAP2-205ENST00000539317 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.88
SMAP2-205ENST00000539317 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
SMAP2-205ENST00000539317 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
SMAP2-205ENST00000539317 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMAP2-205ENST00000539317 EIF4G1Q04637 1599 aaKnown RBP19.92■□□□□ 0.78
SMAP2-205ENST00000539317 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
SMAP2-205ENST00000539317 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
SMAP2-205ENST00000539317 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
SMAP2-205ENST00000539317 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
SMAP2-205ENST00000539317 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
SMAP2-205ENST00000539317 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
SMAP2-205ENST00000539317 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
SMAP2-205ENST00000539317 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
SMAP2-205ENST00000539317 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
SMAP2-205ENST00000539317 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
SMAP2-205ENST00000539317 HMGXB3Q12766 1538 aa19.45■□□□□ 0.7
SMAP2-205ENST00000539317 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
SMAP2-205ENST00000539317 WIZO95785 1651 aa19.28■□□□□ 0.68
SMAP2-205ENST00000539317 RSF1Q96T23 1441 aaPredicted RBP19.26■□□□□ 0.67
SMAP2-205ENST00000539317 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
SMAP2-205ENST00000539317 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
SMAP2-205ENST00000539317 NESP48681 1621 aa18.89■□□□□ 0.62
SMAP2-205ENST00000539317 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
SMAP2-205ENST00000539317 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
SMAP2-205ENST00000539317 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
SMAP2-205ENST00000539317 CFTRP13569 1480 aa18.81■□□□□ 0.6
SMAP2-205ENST00000539317 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
SMAP2-205ENST00000539317 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
SMAP2-205ENST00000539317 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
SMAP2-205ENST00000539317 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
SMAP2-205ENST00000539317 CUX2O14529 1486 aa18.68■□□□□ 0.58
SMAP2-205ENST00000539317 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
SMAP2-205ENST00000539317 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
SMAP2-205ENST00000539317 MRC2Q9UBG0 1479 aa18.61■□□□□ 0.57
SMAP2-205ENST00000539317 WDR62O43379 1518 aa18.6■□□□□ 0.57
SMAP2-205ENST00000539317 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
SMAP2-205ENST00000539317 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
SMAP2-205ENST00000539317 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
SMAP2-205ENST00000539317 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
SMAP2-205ENST00000539317 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
SMAP2-205ENST00000539317 CUX1P39880 1505 aa18.28■□□□□ 0.52
SMAP2-205ENST00000539317 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
SMAP2-205ENST00000539317 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
SMAP2-205ENST00000539317 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
SMAP2-205ENST00000539317 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
SMAP2-205ENST00000539317 WDR97A6NE52 1622 aa18.19■□□□□ 0.5
SMAP2-205ENST00000539317 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
SMAP2-205ENST00000539317 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
SMAP2-205ENST00000539317 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
SMAP2-205ENST00000539317 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
SMAP2-205ENST00000539317 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
SMAP2-205ENST00000539317 ZNF608Q9ULD9 1512 aaPredicted RBP18.1■□□□□ 0.49
SMAP2-205ENST00000539317 SOGA1O94964 1423 aa18.09■□□□□ 0.49
SMAP2-205ENST00000539317 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
SMAP2-205ENST00000539317 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
SMAP2-205ENST00000539317 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
SMAP2-205ENST00000539317 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
SMAP2-205ENST00000539317 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■■□□ 15.8
SMAP2-205ENST00000539317 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
SMAP2-205ENST00000539317 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
SMAP2-205ENST00000539317 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
SMAP2-205ENST00000539317 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
SMAP2-205ENST00000539317 CHD1O14646 1710 aa17.89■□□□□ 0.45
SMAP2-205ENST00000539317 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
SMAP2-205ENST00000539317 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
SMAP2-205ENST00000539317 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
SMAP2-205ENST00000539317 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
SMAP2-205ENST00000539317 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
SMAP2-205ENST00000539317 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
SMAP2-205ENST00000539317 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
SMAP2-205ENST00000539317 CUL7Q14999 1698 aa17.74■□□□□ 0.43
SMAP2-205ENST00000539317 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
SMAP2-205ENST00000539317 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
SMAP2-205ENST00000539317 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
SMAP2-205ENST00000539317 IGF1RP08069 1367 aa17.67■□□□□ 0.42
SMAP2-205ENST00000539317 NUP160Q12769 1436 aa17.66■□□□□ 0.42
SMAP2-205ENST00000539317 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
SMAP2-205ENST00000539317 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
SMAP2-205ENST00000539317 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
SMAP2-205ENST00000539317 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
SMAP2-205ENST00000539317 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
SMAP2-205ENST00000539317 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
SMAP2-205ENST00000539317 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
SMAP2-205ENST00000539317 FBLN2P98095 1184 aa17.59■□□□□ 0.41
SMAP2-205ENST00000539317 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
SMAP2-205ENST00000539317 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
SMAP2-205ENST00000539317 CARMIL1Q5VZK9 1371 aa17.54■□□□□ 0.4
SMAP2-205ENST00000539317 EEA1Q15075 1411 aa17.53■□□□□ 0.4
SMAP2-205ENST00000539317 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
SMAP2-205ENST00000539317 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms