RNA–Protein interactions for RNA: ENST00000378886.6

MCM8-203, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM8, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-203ENST00000378886 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
MCM8-203ENST00000378886 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
MCM8-203ENST00000378886 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
MCM8-203ENST00000378886 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
MCM8-203ENST00000378886 ABCC9O60706 1549 aa15.27■□□□□ 0.04
MCM8-203ENST00000378886 HRCP23327 699 aa15.15■□□□□ 0.02
MCM8-203ENST00000378886 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
MCM8-203ENST00000378886 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
MCM8-203ENST00000378886 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
MCM8-203ENST00000378886 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
MCM8-203ENST00000378886 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
MCM8-203ENST00000378886 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
MCM8-203ENST00000378886 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
MCM8-203ENST00000378886 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
MCM8-203ENST00000378886 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
MCM8-203ENST00000378886 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
MCM8-203ENST00000378886 CHIC1Q5VXU3 224 aa14.46□□□□□ -0.09
MCM8-203ENST00000378886 SCRIBQ14160 1630 aa14.46□□□□□ -0.1
MCM8-203ENST00000378886 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
MCM8-203ENST00000378886 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
MCM8-203ENST00000378886 NACADO15069 1562 aa14.32□□□□□ -0.12
MCM8-203ENST00000378886 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
MCM8-203ENST00000378886 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
MCM8-203ENST00000378886 MYT1Q01538 1121 aa14.23□□□□□ -0.13
MCM8-203ENST00000378886 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
MCM8-203ENST00000378886 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
MCM8-203ENST00000378886 TRIM26Q12899 539 aaPredicted RBP14.14□□□□□ -0.15
MCM8-203ENST00000378886 NEUROD1Q13562 356 aa14.04□□□□□ -0.16
MCM8-203ENST00000378886 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.17
MCM8-203ENST00000378886 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
MCM8-203ENST00000378886 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
MCM8-203ENST00000378886 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
MCM8-203ENST00000378886 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
MCM8-203ENST00000378886 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
MCM8-203ENST00000378886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.19
MCM8-203ENST00000378886 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
MCM8-203ENST00000378886 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
MCM8-203ENST00000378886 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
MCM8-203ENST00000378886 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
MCM8-203ENST00000378886 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
MCM8-203ENST00000378886 ATP1B4Q9UN42 357 aaPredicted RBP13.71□□□□□ -0.22
MCM8-203ENST00000378886 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
MCM8-203ENST00000378886 APLP2Q06481 763 aa13.65□□□□□ -0.22
MCM8-203ENST00000378886 DIEXFQ68CQ4 756 aaKnown RBP13.64□□□□□ -0.23
MCM8-203ENST00000378886 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
MCM8-203ENST00000378886 WIZO95785 1651 aa13.56□□□□□ -0.24
MCM8-203ENST00000378886 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
MCM8-203ENST00000378886 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
MCM8-203ENST00000378886 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
MCM8-203ENST00000378886 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
MCM8-203ENST00000378886 SMARCA2P51531 1590 aa13.47□□□□□ -0.25
MCM8-203ENST00000378886 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
MCM8-203ENST00000378886 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
MCM8-203ENST00000378886 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
MCM8-203ENST00000378886 FBLN2P98095 1184 aa13.44□□□□□ -0.26
MCM8-203ENST00000378886 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
MCM8-203ENST00000378886 ITGAEP38570 1179 aa13.36□□□□□ -0.27
MCM8-203ENST00000378886 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
MCM8-203ENST00000378886 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
MCM8-203ENST00000378886 MIER1Q8N108 512 aa13.33□□□□□ -0.28
MCM8-203ENST00000378886 ANP32EQ9BTT0 268 aa13.33□□□□□ -0.28
MCM8-203ENST00000378886 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
MCM8-203ENST00000378886 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
MCM8-203ENST00000378886 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
MCM8-203ENST00000378886 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
MCM8-203ENST00000378886 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
MCM8-203ENST00000378886 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
MCM8-203ENST00000378886 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
MCM8-203ENST00000378886 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
MCM8-203ENST00000378886 ABCC8Q09428 1581 aa13.23□□□□□ -0.29
MCM8-203ENST00000378886 ARID3CA6NKF2 412 aa13.22□□□□□ -0.29
MCM8-203ENST00000378886 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
MCM8-203ENST00000378886 PDS5BQ9NTI5 1447 aa13.19□□□□□ -0.3
MCM8-203ENST00000378886 NESP48681 1621 aa13.15□□□□□ -0.3
MCM8-203ENST00000378886 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
MCM8-203ENST00000378886 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
MCM8-203ENST00000378886 BCANQ96GW7 911 aa13.12□□□□□ -0.31
MCM8-203ENST00000378886 SOGA1O94964 1423 aa13.11□□□□□ -0.31
MCM8-203ENST00000378886 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
MCM8-203ENST00000378886 TDRD9Q8NDG6 1382 aaKnown RBP13.09□□□□□ -0.31
MCM8-203ENST00000378886 HMGXB3Q12766 1538 aa13.08□□□□□ -0.32
MCM8-203ENST00000378886 CUX2O14529 1486 aa13.06□□□□□ -0.32
MCM8-203ENST00000378886 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
MCM8-203ENST00000378886 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
MCM8-203ENST00000378886 NEFLP07196 543 aa13.05□□□□□ -0.32
MCM8-203ENST00000378886 CFTRP13569 1480 aa13.01□□□□□ -0.33
MCM8-203ENST00000378886 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
MCM8-203ENST00000378886 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
MCM8-203ENST00000378886 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
MCM8-203ENST00000378886 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
MCM8-203ENST00000378886 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
MCM8-203ENST00000378886 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
MCM8-203ENST00000378886 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.34
MCM8-203ENST00000378886 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
MCM8-203ENST00000378886 EEA1Q15075 1411 aa12.95□□□□□ -0.34
MCM8-203ENST00000378886 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
MCM8-203ENST00000378886 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
MCM8-203ENST00000378886 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
MCM8-203ENST00000378886 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
MCM8-203ENST00000378886 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms