RNA–Protein interactions for RNA: ENST00000493216.1

MED15-231, Transcript of mediator complex subunit 15, humanhuman

TSL 2

Gene MED15, Length 4,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-231ENST00000493216 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
MED15-231ENST00000493216 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
MED15-231ENST00000493216 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.07
MED15-231ENST00000493216 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
MED15-231ENST00000493216 APLP2Q06481 763 aa26.82■■□□□ 1.88
MED15-231ENST00000493216 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
MED15-231ENST00000493216 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
MED15-231ENST00000493216 PELP1Q8IZL8 1130 aaKnown RBP26.45■■□□□ 1.82
MED15-231ENST00000493216 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
MED15-231ENST00000493216 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
MED15-231ENST00000493216 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
MED15-231ENST00000493216 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
MED15-231ENST00000493216 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
MED15-231ENST00000493216 RANGAP1P46060 587 aaPredicted RBP25.76■■□□□ 1.71
MED15-231ENST00000493216 ATP1B4Q9UN42 357 aaPredicted RBP25.71■■□□□ 1.71
MED15-231ENST00000493216 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
MED15-231ENST00000493216 CENPBP07199 599 aaPredicted RBP25.52■■□□□ 1.68
MED15-231ENST00000493216 ERICH6Q7L0X2 663 aa25.08■■□□□ 1.6
MED15-231ENST00000493216 NEFLP07196 543 aa25.05■■□□□ 1.6
MED15-231ENST00000493216 TRIM26Q12899 539 aaPredicted RBP25.02■■□□□ 1.6
MED15-231ENST00000493216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.95■■□□□ 1.58
MED15-231ENST00000493216 HNRNPUL2Q1KMD3 747 aaKnown RBP24.95■■□□□ 1.58
MED15-231ENST00000493216 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
MED15-231ENST00000493216 MYT1LQ9UL68 1186 aa24.85■■□□□ 1.57
MED15-231ENST00000493216 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
MED15-231ENST00000493216 ITGAEP38570 1179 aa24.74■■□□□ 1.55
MED15-231ENST00000493216 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
MED15-231ENST00000493216 ABCC9O60706 1549 aa24.64■■□□□ 1.54
MED15-231ENST00000493216 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
MED15-231ENST00000493216 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.513e-7■□□□□ 8.9
MED15-231ENST00000493216 POLR3GLQ9BT43 218 aa24.49■■□□□ 1.51
MED15-231ENST00000493216 HRCP23327 699 aa24.49■■□□□ 1.51
MED15-231ENST00000493216 DAXXQ9UER7 740 aaPredicted RBP24.26■■□□□ 1.47
MED15-231ENST00000493216 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
MED15-231ENST00000493216 MYT1Q01538 1121 aa24.21■■□□□ 1.47
MED15-231ENST00000493216 TRIM52Q96A61 297 aa24.14■■□□□ 1.45
MED15-231ENST00000493216 SLC4A1APQ9BWU0 796 aaKnown RBP24.12■■□□□ 1.45
MED15-231ENST00000493216 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
MED15-231ENST00000493216 FBLN2P98095 1184 aa24.01■■□□□ 1.43
MED15-231ENST00000493216 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
MED15-231ENST00000493216 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
MED15-231ENST00000493216 NEUROD1Q13562 356 aa23.88■■□□□ 1.41
MED15-231ENST00000493216 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
MED15-231ENST00000493216 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
MED15-231ENST00000493216 ANP32CO43423 234 aa23.75■■□□□ 1.39
MED15-231ENST00000493216 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
MED15-231ENST00000493216 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
MED15-231ENST00000493216 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
MED15-231ENST00000493216 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.38
MED15-231ENST00000493216 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
MED15-231ENST00000493216 RTL5Q5HYW3 569 aaPredicted RBP23.57■■□□□ 1.36
MED15-231ENST00000493216 NEFMP07197 916 aa23.56■■□□□ 1.36
MED15-231ENST00000493216 ZBTB47Q9UFB7 747 aaPredicted RBP23.56■■□□□ 1.36
MED15-231ENST00000493216 ZNF777Q9ULD5 760 aaPredicted RBP23.53■■□□□ 1.36
MED15-231ENST00000493216 ARID3CA6NKF2 412 aa23.51■■□□□ 1.35
MED15-231ENST00000493216 BCANQ96GW7 911 aa23.48■■□□□ 1.35
MED15-231ENST00000493216 NPM1P06748 294 aaKnown RBP eCLIP23.47■■□□□ 1.35
MED15-231ENST00000493216 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
MED15-231ENST00000493216 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
MED15-231ENST00000493216 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
MED15-231ENST00000493216 TONSLQ96HA7 1378 aa23.32■■□□□ 1.32
MED15-231ENST00000493216 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
MED15-231ENST00000493216 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
MED15-231ENST00000493216 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
MED15-231ENST00000493216 TSPY4P0CV99 314 aa23.2■■□□□ 1.31
MED15-231ENST00000493216 TSPY10P0CW01 314 aa23.2■■□□□ 1.31
MED15-231ENST00000493216 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
MED15-231ENST00000493216 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
MED15-231ENST00000493216 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
MED15-231ENST00000493216 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
MED15-231ENST00000493216 MTUS2Q5JR59 1369 aa23.13■■□□□ 1.29
MED15-231ENST00000493216 EEA1Q15075 1411 aa23.09■■□□□ 1.29
MED15-231ENST00000493216 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
MED15-231ENST00000493216 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
MED15-231ENST00000493216 CLIP1P30622 1438 aa23.01■■□□□ 1.27
MED15-231ENST00000493216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.275e-6■□□□□ 8.1
MED15-231ENST00000493216 NACADO15069 1562 aa22.97■■□□□ 1.27
MED15-231ENST00000493216 ANP32AP39687 249 aaKnown RBP22.97■■□□□ 1.27
MED15-231ENST00000493216 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.27
MED15-231ENST00000493216 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
MED15-231ENST00000493216 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
MED15-231ENST00000493216 PLEKHD1A6NEE1 506 aa22.91■■□□□ 1.26
MED15-231ENST00000493216 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.26
MED15-231ENST00000493216 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
MED15-231ENST00000493216 GOLGA3Q08378 1498 aa22.86■■□□□ 1.25
MED15-231ENST00000493216 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.85■■□□□ 1.25
MED15-231ENST00000493216 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
MED15-231ENST00000493216 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
MED15-231ENST00000493216 FAM9BQ8IZU0 186 aa22.83■■□□□ 1.25
MED15-231ENST00000493216 UPF2Q9HAU5 1272 aaKnown RBP22.82■■□□□ 1.24
MED15-231ENST00000493216 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
MED15-231ENST00000493216 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.242e-7■■■■■ 62.3
MED15-231ENST00000493216 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
MED15-231ENST00000493216 KDM2AQ9Y2K7 1162 aa22.79■■□□□ 1.24
MED15-231ENST00000493216 EIF4G2P78344 907 aaKnown RBP eCLIP22.77■■□□□ 1.24
MED15-231ENST00000493216 FKBP8Q14318 412 aa22.74■■□□□ 1.23
MED15-231ENST00000493216 MRS2Q9HD23 443 aa22.73■■□□□ 1.23
MED15-231ENST00000493216 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
MED15-231ENST00000493216 CEP162Q5TB80 1403 aa22.7■■□□□ 1.23
MED15-231ENST00000493216 HSP90AA1P07900 732 aaKnown RBP22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms