RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
TARDBP-230ENST00000639083 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
TARDBP-230ENST00000639083 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
TARDBP-230ENST00000639083 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
TARDBP-230ENST00000639083 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
TARDBP-230ENST00000639083 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
TARDBP-230ENST00000639083 ABCC9O60706 1549 aa19.38■□□□□ 0.69
TARDBP-230ENST00000639083 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
TARDBP-230ENST00000639083 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
TARDBP-230ENST00000639083 NACADO15069 1562 aa19.08■□□□□ 0.64
TARDBP-230ENST00000639083 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
TARDBP-230ENST00000639083 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
TARDBP-230ENST00000639083 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
TARDBP-230ENST00000639083 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
TARDBP-230ENST00000639083 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
TARDBP-230ENST00000639083 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
TARDBP-230ENST00000639083 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
TARDBP-230ENST00000639083 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
TARDBP-230ENST00000639083 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
TARDBP-230ENST00000639083 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-230ENST00000639083 WIZO95785 1651 aa18.26■□□□□ 0.51
TARDBP-230ENST00000639083 SMARCA4P51532 1647 aa18.19■□□□□ 0.5
TARDBP-230ENST00000639083 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
TARDBP-230ENST00000639083 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
TARDBP-230ENST00000639083 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
TARDBP-230ENST00000639083 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
TARDBP-230ENST00000639083 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
TARDBP-230ENST00000639083 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
TARDBP-230ENST00000639083 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
TARDBP-230ENST00000639083 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
TARDBP-230ENST00000639083 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
TARDBP-230ENST00000639083 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
TARDBP-230ENST00000639083 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
TARDBP-230ENST00000639083 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
TARDBP-230ENST00000639083 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
TARDBP-230ENST00000639083 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
TARDBP-230ENST00000639083 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.396e-7■□□□□ 11.3
TARDBP-230ENST00000639083 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
TARDBP-230ENST00000639083 SOGA1O94964 1423 aa17.4■□□□□ 0.38
TARDBP-230ENST00000639083 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
TARDBP-230ENST00000639083 CFTRP13569 1480 aa17.35■□□□□ 0.37
TARDBP-230ENST00000639083 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
TARDBP-230ENST00000639083 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
TARDBP-230ENST00000639083 EEA1Q15075 1411 aa17.28■□□□□ 0.36
TARDBP-230ENST00000639083 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.36
TARDBP-230ENST00000639083 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
TARDBP-230ENST00000639083 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
TARDBP-230ENST00000639083 CUX1P39880 1505 aa17.18■□□□□ 0.34
TARDBP-230ENST00000639083 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
TARDBP-230ENST00000639083 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
TARDBP-230ENST00000639083 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
TARDBP-230ENST00000639083 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
TARDBP-230ENST00000639083 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
TARDBP-230ENST00000639083 NESP48681 1621 aa17.09■□□□□ 0.33
TARDBP-230ENST00000639083 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
TARDBP-230ENST00000639083 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
TARDBP-230ENST00000639083 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
TARDBP-230ENST00000639083 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-230ENST00000639083 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
TARDBP-230ENST00000639083 KIF21BO75037 1637 aa17.02■□□□□ 0.32
TARDBP-230ENST00000639083 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
TARDBP-230ENST00000639083 KIF27Q86VH2 1401 aa17■□□□□ 0.31
TARDBP-230ENST00000639083 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
TARDBP-230ENST00000639083 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
TARDBP-230ENST00000639083 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
TARDBP-230ENST00000639083 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
TARDBP-230ENST00000639083 CUX2O14529 1486 aa16.92■□□□□ 0.3
TARDBP-230ENST00000639083 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
TARDBP-230ENST00000639083 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
TARDBP-230ENST00000639083 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
TARDBP-230ENST00000639083 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-230ENST00000639083 IGF1RP08069 1367 aa16.87■□□□□ 0.29
TARDBP-230ENST00000639083 CLIP1P30622 1438 aa16.87■□□□□ 0.29
TARDBP-230ENST00000639083 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
TARDBP-230ENST00000639083 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-230ENST00000639083 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
TARDBP-230ENST00000639083 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
TARDBP-230ENST00000639083 HRCP23327 699 aa16.83■□□□□ 0.28
TARDBP-230ENST00000639083 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
TARDBP-230ENST00000639083 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
TARDBP-230ENST00000639083 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
TARDBP-230ENST00000639083 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
TARDBP-230ENST00000639083 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
TARDBP-230ENST00000639083 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
TARDBP-230ENST00000639083 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
TARDBP-230ENST00000639083 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
TARDBP-230ENST00000639083 APLP2Q06481 763 aa16.65■□□□□ 0.26
TARDBP-230ENST00000639083 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
TARDBP-230ENST00000639083 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
TARDBP-230ENST00000639083 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
TARDBP-230ENST00000639083 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
TARDBP-230ENST00000639083 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
TARDBP-230ENST00000639083 CUL7Q14999 1698 aa16.58■□□□□ 0.24
TARDBP-230ENST00000639083 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
TARDBP-230ENST00000639083 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■■□□□ 14.3
TARDBP-230ENST00000639083 WDR62O43379 1518 aa16.52■□□□□ 0.24
TARDBP-230ENST00000639083 P3H3Q8IVL6 736 aa16.52■□□□□ 0.23
TARDBP-230ENST00000639083 KANK4Q5T7N3 995 aaPredicted RBP16.49■□□□□ 0.23
TARDBP-230ENST00000639083 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
TARDBP-230ENST00000639083 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms