RNA–Protein interactions for RNA: ENST00000549077.5

EIF4B-204, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-204ENST00000549077 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
EIF4B-204ENST00000549077 ABCC9O60706 1549 aa20.5■□□□□ 0.87
EIF4B-204ENST00000549077 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
EIF4B-204ENST00000549077 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
EIF4B-204ENST00000549077 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
EIF4B-204ENST00000549077 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
EIF4B-204ENST00000549077 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
EIF4B-204ENST00000549077 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
EIF4B-204ENST00000549077 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
EIF4B-204ENST00000549077 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
EIF4B-204ENST00000549077 NACADO15069 1562 aa18.51■□□□□ 0.55
EIF4B-204ENST00000549077 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
EIF4B-204ENST00000549077 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
EIF4B-204ENST00000549077 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
EIF4B-204ENST00000549077 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
EIF4B-204ENST00000549077 TRIM41Q8WV44 630 aa18■□□□□ 0.47
EIF4B-204ENST00000549077 CUX2O14529 1486 aa17.95■□□□□ 0.46
EIF4B-204ENST00000549077 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
EIF4B-204ENST00000549077 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
EIF4B-204ENST00000549077 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
EIF4B-204ENST00000549077 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
EIF4B-204ENST00000549077 NESP48681 1621 aa17.36■□□□□ 0.37
EIF4B-204ENST00000549077 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
EIF4B-204ENST00000549077 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
EIF4B-204ENST00000549077 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
EIF4B-204ENST00000549077 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
EIF4B-204ENST00000549077 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
EIF4B-204ENST00000549077 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
EIF4B-204ENST00000549077 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
EIF4B-204ENST00000549077 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
EIF4B-204ENST00000549077 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
EIF4B-204ENST00000549077 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
EIF4B-204ENST00000549077 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
EIF4B-204ENST00000549077 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
EIF4B-204ENST00000549077 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
EIF4B-204ENST00000549077 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
EIF4B-204ENST00000549077 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.3
EIF4B-204ENST00000549077 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
EIF4B-204ENST00000549077 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
EIF4B-204ENST00000549077 WDR62O43379 1518 aa16.8■□□□□ 0.28
EIF4B-204ENST00000549077 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
EIF4B-204ENST00000549077 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
EIF4B-204ENST00000549077 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
EIF4B-204ENST00000549077 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
EIF4B-204ENST00000549077 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
EIF4B-204ENST00000549077 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
EIF4B-204ENST00000549077 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
EIF4B-204ENST00000549077 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
EIF4B-204ENST00000549077 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
EIF4B-204ENST00000549077 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
EIF4B-204ENST00000549077 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
EIF4B-204ENST00000549077 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
EIF4B-204ENST00000549077 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
EIF4B-204ENST00000549077 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
EIF4B-204ENST00000549077 CHD1O14646 1710 aa16.3■□□□□ 0.2
EIF4B-204ENST00000549077 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
EIF4B-204ENST00000549077 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
EIF4B-204ENST00000549077 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
EIF4B-204ENST00000549077 CFTRP13569 1480 aa16.19■□□□□ 0.18
EIF4B-204ENST00000549077 FBLN2P98095 1184 aa16.17■□□□□ 0.18
EIF4B-204ENST00000549077 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.177e-7■■■■■ 30.5
EIF4B-204ENST00000549077 WIZO95785 1651 aa16.1■□□□□ 0.17
EIF4B-204ENST00000549077 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
EIF4B-204ENST00000549077 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
EIF4B-204ENST00000549077 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
EIF4B-204ENST00000549077 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
EIF4B-204ENST00000549077 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
EIF4B-204ENST00000549077 KIF13AQ9H1H9 1805 aa15.92■□□□□ 0.14
EIF4B-204ENST00000549077 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
EIF4B-204ENST00000549077 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
EIF4B-204ENST00000549077 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
EIF4B-204ENST00000549077 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
EIF4B-204ENST00000549077 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
EIF4B-204ENST00000549077 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
EIF4B-204ENST00000549077 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
EIF4B-204ENST00000549077 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
EIF4B-204ENST00000549077 HECW2Q9P2P5 1572 aa15.8■□□□□ 0.12
EIF4B-204ENST00000549077 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
EIF4B-204ENST00000549077 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
EIF4B-204ENST00000549077 FBXO41Q8TF61 875 aa15.76■□□□□ 0.11
EIF4B-204ENST00000549077 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
EIF4B-204ENST00000549077 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.1
EIF4B-204ENST00000549077 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
EIF4B-204ENST00000549077 KDM6BO15054 1643 aa15.7■□□□□ 0.1
EIF4B-204ENST00000549077 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
EIF4B-204ENST00000549077 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
EIF4B-204ENST00000549077 ADGRL1O94910 1474 aa15.67■□□□□ 0.1
EIF4B-204ENST00000549077 SOGA1O94964 1423 aa15.67■□□□□ 0.1
EIF4B-204ENST00000549077 ILDR2Q71H61 639 aa15.63■□□□□ 0.09
EIF4B-204ENST00000549077 ABCC10Q5T3U5 1492 aa15.63■□□□□ 0.09
EIF4B-204ENST00000549077 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
EIF4B-204ENST00000549077 GRIN2BQ13224 1484 aa15.62■□□□□ 0.09
EIF4B-204ENST00000549077 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
EIF4B-204ENST00000549077 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
EIF4B-204ENST00000549077 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
EIF4B-204ENST00000549077 SOCS7O14512 581 aa15.58■□□□□ 0.08
EIF4B-204ENST00000549077 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
EIF4B-204ENST00000549077 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
EIF4B-204ENST00000549077 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
EIF4B-204ENST00000549077 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms